RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ISL2Q96A47 359 aa6.38□□□□□ -1.39
TRAV40-201ENST00000390467 ZC3H7BQ9UGR2 993 aaKnown RBP6.38□□□□□ -1.39
TRAV40-201ENST00000390467 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
TRAV40-201ENST00000390467 PATL2C9JE40 543 aaKnown RBP6.37□□□□□ -1.39
TRAV40-201ENST00000390467 GIPC1O14908 333 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 FAM87AP0C7U9 286 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 NTF4P34130 210 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 DUSP27Q5VZP5 1158 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 UBE3DQ7Z6J8 389 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 VSIG10LQ86VR7 867 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 ANKRD24Q8TF21 1146 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 ACSBG1Q96GR2 724 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 EMILIN2Q9BXX0 1053 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 CEP44Q9C0F1 390 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 FAM8A1Q9UBU6 413 aa6.37□□□□□ -1.39
TRAV40-201ENST00000390467 COL17A1Q9UMD9 1497 aaPredicted RBP6.36□□□□□ -1.39
TRAV40-201ENST00000390467 RNGTTO60942 597 aaKnown RBP6.36□□□□□ -1.39
TRAV40-201ENST00000390467 LEFTY1O75610 366 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 ERVK-24P63145 666 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 CYP27A1Q02318 531 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 PCNX4Q63HM2 1172 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 LLGL2Q6P1M3 1020 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 AEBP1Q8IUX7 1158 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
TRAV40-201ENST00000390467 CSADQ9Y600 493 aa6.36□□□□□ -1.39
TRAV40-201ENST00000390467 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 ANKRD33BA6NCL7 494 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 DCDC2CA8MYV0 355 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 PRPF40AO75400 957 aaKnown RBP6.35□□□□□ -1.39
TRAV40-201ENST00000390467 TRIM37O94972 964 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 GNA15P30679 374 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 IRAK1P51617 712 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 COL19A1Q14993 1142 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 RNF214Q8ND24 703 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 BSDC1Q9NW68 430 aaPredicted RBP6.35□□□□□ -1.39
TRAV40-201ENST00000390467 ADGRE2Q9UHX3 823 aa6.35□□□□□ -1.39
TRAV40-201ENST00000390467 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRAV40-201ENST00000390467 PTPN11Q06124 597 aaPredicted RBP6.34□□□□□ -1.39
TRAV40-201ENST00000390467 GAL3ST3Q96A11 431 aa6.34□□□□□ -1.39
TRAV40-201ENST00000390467 DUSP9Q99956 384 aaKnown RBP6.34□□□□□ -1.39
TRAV40-201ENST00000390467 DUSP23Q9BVJ7 150 aa6.34□□□□□ -1.39
TRAV40-201ENST00000390467 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
TRAV40-201ENST00000390467 RING1Q06587 406 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 DNAJC14Q6Y2X3 702 aaPredicted RBP6.33□□□□□ -1.4
TRAV40-201ENST00000390467 ZNF574Q6ZN55 896 aaPredicted RBP6.33□□□□□ -1.4
TRAV40-201ENST00000390467 C12orf40Q86WS4 652 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 NPAS4Q8IUM7 802 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
TRAV40-201ENST00000390467 TOP6BLQ8N6T0 577 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
TRAV40-201ENST00000390467 PCOLCE2Q9UKZ9 415 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
TRAV40-201ENST00000390467 TAL1P17542 331 aaPredicted RBP6.32□□□□□ -1.4
TRAV40-201ENST00000390467 EIF4BP23588 611 aaKnown RBP6.32□□□□□ -1.4
TRAV40-201ENST00000390467 CYP27C1Q4G0S4 372 aa6.32□□□□□ -1.4
TRAV40-201ENST00000390467 ZBTB37Q5TC79 503 aa6.32□□□□□ -1.4
TRAV40-201ENST00000390467 LRFN4Q6PJG9 635 aa6.32□□□□□ -1.4
TRAV40-201ENST00000390467 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
TRAV40-201ENST00000390467 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAV40-201ENST00000390467 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
TRAV40-201ENST00000390467 PCDHA4Q9UN74 947 aa6.32□□□□□ -1.4
TRAV40-201ENST00000390467 PDIA4P13667 645 aaKnown RBP6.31□□□□□ -1.4
TRAV40-201ENST00000390467 CDK8P49336 464 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 INPP5AQ14642 412 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 LRRC14Q15048 493 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 EAPPQ56P03 285 aaPredicted RBP6.31□□□□□ -1.4
TRAV40-201ENST00000390467 SV2BQ7L1I2 683 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 BCL7CQ8WUZ0 217 aaPredicted RBP6.31□□□□□ -1.4
TRAV40-201ENST00000390467 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
TRAV40-201ENST00000390467 SSU72Q9NP77 194 aaKnown RBP6.31□□□□□ -1.4
TRAV40-201ENST00000390467 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 TTBK2Q6IQ55 1244 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 CBLL1Q75N03 491 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 AK5Q9Y6K8 562 aa6.3□□□□□ -1.4
TRAV40-201ENST00000390467 CD96P40200 585 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 OXCT1P55809 520 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
TRAV40-201ENST00000390467 FAM214BQ7L5A3 538 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 ELMO3Q96BJ8 720 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 HEXIM2Q96MH2 286 aaKnown RBP6.29□□□□□ -1.4
TRAV40-201ENST00000390467 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 PLAGL2Q9UPG8 496 aa6.29□□□□□ -1.4
TRAV40-201ENST00000390467 PRAMEF27A3QJZ7 478 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 RBAK-RBAKDNI3L0D1 243 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 FANCGO15287 622 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 CEACAM5P06731 702 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 BNIP3Q12983 259 aa6.28□□□□□ -1.4
TRAV40-201ENST00000390467 SEPT6Q14141 434 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms