RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TGFB2P61812 414 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 MCM9Q9NXL9 1143 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 DAGLAQ9Y4D2 1042 aa14.38□□□□□ -0.11
SPTBN1-203ENST00000389980 PRDM1O75626 825 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 NUCB2P80303 420 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 SCRN1Q12765 414 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 PPFIA3O75145 1194 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 PDIA3P30101 505 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 PTGER2P43116 358 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 MKRN1Q9UHC7 482 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 GAKO14976 1311 aa14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 ZNF646O15015 1829 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 BRCA1P38398 1863 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-203ENST00000389980 LAMB1P07942 1786 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 JAK2O60674 1132 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 IGSF3O75054 1194 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 RHBDL3P58872 404 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 DACT2Q5SW24 774 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 KIAA0825Q8IV33 1275 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 KRT23Q9C075 422 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 CNNM2Q9H8M5 875 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 NAV1Q8NEY1 1877 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 KLF18A0A0U1RQI7 1052 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 PFKFB2O60825 505 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 DALRD3Q5D0E6 543 aaKnown RBP14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 STRIP1Q5VSL9 837 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 IGDCC4Q8TDY8 1250 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 CHAMP1Q96JM3 812 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 PCDHAC2Q9Y5I4 1007 aa14.36□□□□□ -0.11
SPTBN1-203ENST00000389980 COL4A5P29400 1685 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 USP17L3A6NCW0 530 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 USP17L4A6NCW7 530 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 USP17L1Q7RTZ2 530 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 WDR19Q8NEZ3 1342 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 PSMD1Q99460 953 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 ANGEL1Q9UNK9 670 aaKnown RBP14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 SUGT1Q9Y2Z0 365 aa14.35□□□□□ -0.11
SPTBN1-203ENST00000389980 IFIT3O14879 490 aaKnown RBP14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 SYT1P21579 422 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 LARGE2Q8N3Y3 721 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 DYNLL2Q96FJ2 89 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 ZNF274Q96GC6 653 aaPredicted RBP14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 ARPP21Q9UBL0 812 aaPredicted RBP14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 MYH1P12882 1939 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 BRD1O95696 1058 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 RXRAP19793 462 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 EVCP57679 992 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 LY9Q9HBG7 655 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 HPS5Q9UPZ3 1129 aa14.34□□□□□ -0.11
SPTBN1-203ENST00000389980 GOLGA8BA8MQT2 603 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 RAD17O75943 681 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 CTDNEP1O95476 244 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 MCM4P33991 863 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 PLCD1P51178 756 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 GSE1Q14687 1217 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 C12orf60Q5U649 245 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 BCS1LQ9Y276 419 aa14.33□□□□□ -0.11
SPTBN1-203ENST00000389980 FLT1P17948 1338 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 PLCG2P16885 1265 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 CRKP46108 304 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 PICALMQ13492 652 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 FOXD4L6Q3SYB3 417 aaPredicted RBP14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 FOXD4L3Q6VB84 417 aaPredicted RBP14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 TEKT1Q969V4 418 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 TMEM87BQ96K49 555 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
SPTBN1-203ENST00000389980 STX6O43752 255 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 FGRP09769 529 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 FAM47AQ5JRC9 791 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 CCDC144CPQ8IYA2 1237 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 ESR2Q92731 530 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 USP40Q9NVE5 1235 aa14.32□□□□□ -0.12
SPTBN1-203ENST00000389980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms