RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 KCNN1Q92952 543 aa3.67□□□□□ -1.82
SNORA40-201ENST00000388090 WDR89Q96FK6 387 aaPredicted RBP3.67□□□□□ -1.82
SNORA40-201ENST00000388090 PIDD1Q9HB75 910 aa3.67□□□□□ -1.82
SNORA40-201ENST00000388090 CXXC1Q9P0U4 656 aaPredicted RBP3.67□□□□□ -1.82
SNORA40-201ENST00000388090 CNTNAP4Q9C0A0 1308 aa3.67□□□□□ -1.82
SNORA40-201ENST00000388090 TNFRSF21O75509 655 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 B3GALT4O96024 378 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 PDGFAP04085 211 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 GRIA4P48058 902 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 PDE3AQ14432 1141 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 SPRED3Q2MJR0 410 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 TOP6BLQ8N6T0 577 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 BORCS6Q96GS4 357 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 SLC26A8Q96RN1 970 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 ATXN3LQ9H3M9 355 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 CARS2Q9HA77 564 aaKnown RBP3.66□□□□□ -1.82
SNORA40-201ENST00000388090 NOVA2Q9UNW9 492 aaKnown RBP3.66□□□□□ -1.82
SNORA40-201ENST00000388090 PCDHGC5Q9Y5F6 944 aa3.66□□□□□ -1.82
SNORA40-201ENST00000388090 IGF2BP3O00425 579 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNORA40-201ENST00000388090 TRIM13O60858 407 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 PHACTR2O75167 634 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 NEFMP07197 916 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 UBTFP17480 764 aaKnown RBP3.65□□□□□ -1.83
SNORA40-201ENST00000388090 LIG1P18858 919 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 ID3Q02535 119 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 DNM1Q05193 864 aaKnown RBP3.65□□□□□ -1.83
SNORA40-201ENST00000388090 TTLL4Q14679 1199 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 C8orf34Q49A92 452 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 CCNJLQ8IV13 435 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 BAHD1Q8TBE0 780 aaPredicted RBP3.65□□□□□ -1.83
SNORA40-201ENST00000388090 XYLT2Q9H1B5 865 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 ADAMTS20P59510 1910 aa3.65□□□□□ -1.83
SNORA40-201ENST00000388090 HCLS1P14317 486 aaPredicted RBP3.64□□□□□ -1.83
SNORA40-201ENST00000388090 CLCN7P51798 805 aa3.64□□□□□ -1.83
SNORA40-201ENST00000388090 FNBP4Q8N3X1 1017 aaPredicted RBP3.64□□□□□ -1.83
SNORA40-201ENST00000388090 TCF12Q99081 682 aa3.64□□□□□ -1.83
SNORA40-201ENST00000388090 CCDC86Q9H6F5 360 aaKnown RBP3.64□□□□□ -1.83
SNORA40-201ENST00000388090 FOXD3Q9UJU5 478 aaPredicted RBP3.64□□□□□ -1.83
SNORA40-201ENST00000388090 PCOLCE2Q9UKZ9 415 aa3.64□□□□□ -1.83
SNORA40-201ENST00000388090 SUV39H1O43463 412 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 ZNF862O60290 1169 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 RNGTTO60942 597 aaKnown RBP3.63□□□□□ -1.83
SNORA40-201ENST00000388090 CELA3BP08861 270 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 PCSK2P16519 638 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 MZF1P28698 734 aaPredicted RBP3.63□□□□□ -1.83
SNORA40-201ENST00000388090 ZXDCQ2QGD7 858 aaPredicted RBP3.63□□□□□ -1.83
SNORA40-201ENST00000388090 SNX29Q8TEQ0 813 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 SEMA3GQ9NS98 782 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 GTF2IRD1Q9UHL9 959 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 ZMIZ1Q9ULJ6 1067 aa3.63□□□□□ -1.83
SNORA40-201ENST00000388090 SLFN14P0C7P3 912 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 KIF4BQ2VIQ3 1234 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 CDCA8Q53HL2 280 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 CFAP70Q5T0N1 1121 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 ABHD4Q8TB40 342 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 DDX54Q8TDD1 881 aaKnown RBP3.62□□□□□ -1.83
SNORA40-201ENST00000388090 ISL2Q96A47 359 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 ATP13A1Q9HD20 1204 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 AMOTL2Q9Y2J4 779 aa3.62□□□□□ -1.83
SNORA40-201ENST00000388090 A0A1W2PP55 124 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 OTOL1A6NHN0 477 aaPredicted RBP3.61□□□□□ -1.83
SNORA40-201ENST00000388090 IGHA2P01877 340 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 RFX1P22670 979 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 DLG4P78352 724 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 AP3B2Q13367 1082 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 TCERG1LQ5VWI1 586 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 NPAS4Q8IUM7 802 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 TTC16Q8NEE8 873 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 CALR3Q96L12 384 aaKnown RBP3.61□□□□□ -1.83
SNORA40-201ENST00000388090 MCOLN1Q9GZU1 580 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 ZNF576Q9H609 170 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 SEPT3Q9UH03 358 aa3.61□□□□□ -1.83
SNORA40-201ENST00000388090 MYOCOSA0A1B0GUC4 107 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 POLR3DP05423 398 aaPredicted RBP3.6□□□□□ -1.83
SNORA40-201ENST00000388090 EFEMP1Q12805 493 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNORA40-201ENST00000388090 STK32AQ8WU08 396 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 HSPA12BQ96MM6 686 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 LIN7BQ9HAP6 207 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 ZFYVE28Q9HCC9 887 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 POLIQ9UNA4 740 aa3.6□□□□□ -1.83
SNORA40-201ENST00000388090 GNAT3A8MTJ3 354 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 AKAP8O43823 692 aaKnown RBP3.59□□□□□ -1.83
SNORA40-201ENST00000388090 EOMESO95936 686 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 ITPKAP23677 461 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 ERVFC1P60507 584 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 ELOAQ14241 798 aaKnown RBP3.59□□□□□ -1.83
SNORA40-201ENST00000388090 NOM1Q5C9Z4 860 aaKnown RBP3.59□□□□□ -1.83
SNORA40-201ENST00000388090 CCDC120Q96HB5 630 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 CRELD1Q96HD1 420 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 ALPK1Q96QP1 1244 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 ZC3H12CQ9C0D7 883 aaKnown RBP3.59□□□□□ -1.83
SNORA40-201ENST00000388090 PRDM10Q9NQV6 1147 aa3.59□□□□□ -1.83
SNORA40-201ENST00000388090 CNOT6Q9ULM6 557 aaKnown RBP3.59□□□□□ -1.83
SNORA40-201ENST00000388090 OVOL3O00110 214 aa3.58□□□□□ -1.84
SNORA40-201ENST00000388090 INSRRP14616 1297 aa3.58□□□□□ -1.84
SNORA40-201ENST00000388090 RAC2P15153 192 aa3.58□□□□□ -1.84
SNORA40-201ENST00000388090 EIF1AXP47813 144 aaKnown RBP3.58□□□□□ -1.84
SNORA40-201ENST00000388090 FLIIQ13045 1269 aa3.58□□□□□ -1.84
SNORA40-201ENST00000388090 GALNT12Q8IXK2 581 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms