RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 ICE2Q659A1 982 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 HAUS7Q99871 368 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 CRNKL1Q9BZJ0 848 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 FAM204AQ9H8W3 233 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 USP16Q9Y5T5 823 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 OCA2Q04671 838 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 LGSNQ5TDP6 509 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 NRBF2Q96F24 287 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 DDX42Q86XP3 938 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 NCOA7Q8NI08 942 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 MCM10Q7L590 875 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 MGARPQ8TDB4 240 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 KDM1AO60341 852 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 RPS6KA2Q15349 733 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 TRMT1LQ7Z2T5 733 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 ANKRD42Q8N9B4 389 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 YIPF3Q9GZM5 350 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
SMARCA2-209ENST00000382203 A0A087WUV0 522 aaPredicted RBP13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 SLC26A6Q9BXS9 759 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 MAFGO15525 162 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 NBPF20Q3BBV1 942 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 ST13P4Q8IZP2 240 aaPredicted RBP13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 ARMC2Q8NEN0 867 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 BMP15O95972 392 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 AFMP43652 599 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 ARHGAP4P98171 946 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
SMARCA2-209ENST00000382203 MPRIPQ6WCQ1 1025 aa13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 CNGA4Q8IV77 575 aa13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 MED4Q9NPJ6 270 aa13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 IFNKQ9P0W0 207 aa13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 ERICH3Q5RHP9 1530 aa13.71□□□□□ -0.22
SMARCA2-209ENST00000382203 KCNA4P22459 653 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 PSMD2Q13200 908 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 CCDC124Q96CT7 223 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 SUFUQ9UMX1 484 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 TTC4O95801 387 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 HEATR3Q7Z4Q2 680 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 TCP11Q8WWU5 503 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 TRIM31Q9BZY9 425 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 HMG20BQ9P0W2 317 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 EVI5O60447 810 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 ZFYVE1Q9HBF4 777 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 EEF1B2P24534 225 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 STAT6P42226 847 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 CCT5P48643 541 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 IL1RL1Q01638 556 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 UBXN1Q04323 297 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 TYRO3Q06418 890 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 HOMER3Q9NSC5 361 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 S100BP04271 92 aaPredicted RBP13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
SMARCA2-209ENST00000382203 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 TRIML2Q8N7C3 387 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 KRT23Q9C075 422 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 PTPRCP08575 1304 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 B4DLN1 442 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 TEX11Q8IYF3 940 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 LRGUKQ96M69 825 aa13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-209ENST00000382203 STMN3Q9NZ72 180 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms