RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 MRPS9P82933 396 aaKnown RBP19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 BRD3Q15059 726 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 PLIN2Q99541 437 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 INF2Q27J81 1249 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 BANK1Q8NDB2 785 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 FAM184BQ9ULE4 1060 aa19.12■□□□□ 0.65
SNAPC3-202ENST00000380821 TTLL12Q14166 644 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 FEZ2Q9UHY8 353 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 FBLN1P23142 703 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 VCX3BQ9H321 246 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 SPOPO43791 374 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 CPA1P15085 419 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 CWF19L2Q2TBE0 894 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 ZNF354CQ86Y25 554 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 NPATQ14207 1427 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 ZNF500O60304 480 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 PICALMQ13492 652 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 SYCE1Q8N0S2 351 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 ZNF202O95125 648 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 CCDC51Q96ER9 411 aa19.11■□□□□ 0.65
SNAPC3-202ENST00000380821 PPFIA4O75335 1185 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 ARHGAP24Q8N264 748 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 CSGALNACT2Q8N6G5 542 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 IQSEC3Q9UPP2 1182 aaPredicted RBP19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 RIMS2Q9UQ26 1411 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 SLC9C1Q4G0N8 1177 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 C17orf53Q8N3J3 647 aaPredicted RBP19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 MIGA1Q8NAN2 632 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 WHAMMP3Q1A5X7 153 aa19.1■□□□□ 0.65
SNAPC3-202ENST00000380821 UHRF1BP1Q6BDS2 1440 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 SGSM2O43147 1006 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 GADD45BO75293 160 aaPredicted RBP19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 SLC39A6Q13433 755 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 ZBTB9Q96C00 473 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 NLRP3Q96P20 1036 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 CFAP221Q4G0U5 840 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 WDR44Q5JSH3 913 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 ANKRD2Q9GZV1 360 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 LIN9Q5TKA1 542 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 POSTNQ15063 836 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 GKAP1Q5VSY0 366 aaPredicted RBP19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 MIPOL1Q8TD10 442 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 GMNNO75496 209 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
SNAPC3-202ENST00000380821 POLR2DO15514 142 aaKnown RBP19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 TNNI3KQ59H18 835 aa19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 VCXQ9H320 206 aa19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 FPGT-TNNI3KV9GXZ4 949 aa19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 CABS1Q96KC9 395 aa19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 ODF2LQ9ULJ1 636 aa19.08■□□□□ 0.65
SNAPC3-202ENST00000380821 SPATS2Q86XZ4 545 aaKnown RBP19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 TCHPQ9BT92 498 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 SSH2Q76I76 1423 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 NPC1L1Q9UHC9 1359 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 B4DLN1 442 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 KIF3CO14782 793 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 MBD4O95243 580 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 SETSIPP0DME0 302 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 MRPL12P52815 198 aaKnown RBP19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.64
SNAPC3-202ENST00000380821 LETM2Q2VYF4 491 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 HAUS3Q68CZ6 603 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 GOLGA8KD6RF30 607 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 KRT5P13647 590 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 ZNF365Q70YC5 407 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 RPUSD2Q8IZ73 545 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 NUCKS1Q9H1E3 243 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 ANGEL1Q9UNK9 670 aaKnown RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 IRS4O14654 1257 aaPredicted RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 ZWINTO95229 277 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 UAP1Q16222 522 aaPredicted RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 TTC38Q5R3I4 469 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 SMC1BQ8NDV3 1235 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 GAS8O95995 478 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 VPS52Q8N1B4 723 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 MCUR1Q96AQ8 359 aa19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
SNAPC3-202ENST00000380821 TNRQ92752 1358 aa19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 TESK2Q96S53 571 aa19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 PLCH2O75038 1416 aa19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 CASQ2O14958 399 aaPredicted RBP19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 BRD1O95696 1058 aa19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 NCBP1Q09161 790 aaKnown RBP19.06■□□□□ 0.64
SNAPC3-202ENST00000380821 MTX1Q13505 466 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms