RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KCNJ6P48051 423 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 RRS1Q15050 365 aaKnown RBP10.61□□□□□ -0.71
PTPRA-204ENST00000380393 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 TMEM94Q12767 1356 aa10.61□□□□□ -0.71
PTPRA-204ENST00000380393 ERICH2A1L162 156 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 DIAPH1O60610 1272 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ZNF189O75820 626 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 CDC25CP30307 473 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ANKZF1Q9H8Y5 726 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 TPX2Q9ULW0 747 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ATP7BP35670 1465 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 GCLCP48506 637 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 GNGT1P63211 74 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 TMEM62Q0P6H9 643 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 SFSWAPQ12872 951 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ACCSLQ4AC99 568 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 CYB5D1Q6P9G0 228 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 SLC4A10Q6U841 1118 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 FAM228AQ86W67 206 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 CCDC13Q8IYE1 715 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 SYCP3Q8IZU3 236 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 CAPS2Q9BXY5 557 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 TMOD4Q9NZQ9 345 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ANKIB1Q9P2G1 1089 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 IMPACTQ9P2X3 320 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 PUF60Q9UHX1 559 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 HMMRO75330 724 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 PRPF6O94906 941 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 FERP16591 822 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 MIPOL1Q8TD10 442 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 MAGEC3Q8TD91 643 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 DHX58Q96C10 678 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 TRIM7Q9C029 511 aa10.6□□□□□ -0.71
PTPRA-204ENST00000380393 ATXN2Q99700 1313 aaKnown RBP10.6□□□□□ -0.71
PTPRA-204ENST00000380393 M0R2C6 588 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 EIF3HO15372 352 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 SYF2O95926 243 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 IFIT2P09913 472 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 GJA8P48165 433 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 ALDH1L2Q3SY69 923 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 GORASP1Q9BQQ3 440 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RAB21Q9UL25 225 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RGPD8O14715 1765 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 GOLGA6L7A0A1B0GV03 622 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 A0A1B0GVG6 124 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 ZNF202O95125 648 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RHOXF2BP0C7M4 288 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 PSME1Q06323 249 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 MYO1EQ12965 1108 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 TWISTNBQ3B726 338 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 C11orf57Q6ZUT1 292 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 SDCCAG8Q86SQ7 713 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 TTC6Q86TZ1 520 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 WDR24Q96S15 920 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RHOXF2Q9BQY4 288 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 RIPOR2Q9Y4F9 1068 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 CSB-PGBD3P0DP91 1061 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 CUL3Q13618 768 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 KIF4BQ2VIQ3 1234 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
PTPRA-204ENST00000380393 CORO1CQ9ULV4 474 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-204ENST00000380393 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
PTPRA-204ENST00000380393 RTL1A6NKG5 1358 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 RGS12O14924 1447 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 SMIM24O75264 130 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 VAMP4O75379 141 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 VSNL1P62760 191 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 SPATS2Q86XZ4 545 aaKnown RBP10.58□□□□□ -0.72
PTPRA-204ENST00000380393 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
PTPRA-204ENST00000380393 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 UNC45AQ9H3U1 944 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 MYBL1P10243 752 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 PPFIA1Q13136 1202 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
PTPRA-204ENST00000380393 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 ENOX2Q16206 610 aaKnown RBP10.58□□□□□ -0.72
PTPRA-204ENST00000380393 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
PTPRA-204ENST00000380393 SRGAP1Q7Z6B7 1085 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms