RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TTC30AQ86WT1 665 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 MICU3Q86XE3 530 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 GDPD2Q9HCC8 539 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 CLIP2Q9UDT6 1046 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 A0A1B0GUL7 405 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 MBD4O95243 580 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 RNASELQ05823 741 aaKnown RBP7.52□□□□□ -1.21
NEDD9-202ENST00000379446 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 LDHDQ86WU2 507 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 DCTPP1Q9H773 170 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 PPRC1Q5VV67 1664 aaKnown RBP7.52□□□□□ -1.21
NEDD9-202ENST00000379446 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-202ENST00000379446 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 MYL3P08590 195 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 TFCP2Q12800 502 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 PKP1Q13835 747 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 RASA3Q14644 834 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 TMEM266Q2M3C6 531 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 CCDC178Q5BJE1 867 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 IL17REQ8NFR9 667 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 RAB34Q9BZG1 259 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 BICC1Q9H694 974 aaKnown RBP7.51□□□□□ -1.21
NEDD9-202ENST00000379446 GREM2Q9H772 168 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 MYOM1P52179 1685 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 TULP4Q9NRJ4 1543 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 DESP17661 470 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 GCKRQ14397 625 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 ZNF354CQ86Y25 554 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 HACE1Q8IYU2 909 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 ECHDC1Q9NTX5 307 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 MROH5Q6ZUA9 1318 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 DTNBO60941 627 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 CETPP11597 493 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 ANKRD13AQ8IZ07 590 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-202ENST00000379446 SLITRK6Q9H5Y7 841 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 QRICH2Q9H0J4 1663 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 NAPAP54920 295 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 HTRA3P83110 453 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 CEBPZQ03701 1054 aaKnown RBP7.51□□□□□ -1.21
NEDD9-202ENST00000379446 SMC1AQ14683 1233 aaKnown RBP7.51□□□□□ -1.21
NEDD9-202ENST00000379446 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 ADGRB3O60242 1522 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 ZFYVE9O95405 1425 aa7.51□□□□□ -1.21
NEDD9-202ENST00000379446 FKTNO75072 461 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 RAG1P15918 1043 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 SYAP1Q96A49 352 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 TRIM47Q96LD4 638 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 PIDD1Q9HB75 910 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 FSD2A1L4K1 749 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 DDX39AO00148 427 aaKnown RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 PSMD14O00487 310 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 NFX1Q12986 1120 aaKnown RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 HLFQ16534 295 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 RC3H1Q5TC82 1133 aaKnown RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 USP26Q9BXU7 913 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 GLI2P10070 1586 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 PTPRCP08575 1304 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 DNM2P50570 870 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 EIF4A1P60842 406 aaKnown RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 WTAPQ15007 396 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 GNPTABQ3T906 1256 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 DPH6Q7L8W6 267 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ABCC4O15439 1325 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ABCC3O15438 1527 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 C6orf222P0C671 652 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 MX1P20591 662 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 KLHL40Q2TBA0 621 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ARHGEF16Q5VV41 709 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ZNF784Q8NCA9 323 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-202ENST00000379446 CCDC150Q8NCX0 1101 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
NEDD9-202ENST00000379446 ERVV-1B6SEH8 477 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 PCCAP05165 728 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ZFYP08048 801 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 PDE1AP54750 535 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 SP8Q8IXZ3 490 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 SYCP3Q8IZU3 236 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ADD3Q9UEY8 706 aaKnown RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 CYP46A1Q9Y6A2 500 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 PALM3A6NDB9 673 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 PPFIA3O75145 1194 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 UPP2O95045 317 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ASNSP08243 561 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 PDIA4P13667 645 aaKnown RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 GYS1P13807 737 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 LBX1P52954 281 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ITPK1Q13572 414 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ZSCAN23Q3MJ62 389 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ANO1Q5XXA6 986 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 STYK1Q6J9G0 422 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 MTERF4Q7Z6M4 381 aaKnown RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 NLRP10Q86W26 655 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ARMT1Q9H993 441 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms