RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 CSRNP1Q96S65 589 aa26.57■■□□□ 1.84
GFRA3-202ENST00000378362 SALL3Q9BXA9 1300 aa26.57■■□□□ 1.84
GFRA3-202ENST00000378362 TCRBV5S4A2TA0A5A2 114 aa26.56■■□□□ 1.84
GFRA3-202ENST00000378362 FAM196BA6NMK8 535 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 PPP4CP60510 307 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 CHD1LQ86WJ1 897 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 CNKSR2Q8WXI2 1034 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 ZKSCAN4Q969J2 545 aaPredicted RBP26.55■■□□□ 1.84
GFRA3-202ENST00000378362 CDK5RAP2Q96SN8 1893 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 ENTPD3O75355 529 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 IREB2P48200 963 aaKnown RBP26.55■■□□□ 1.84
GFRA3-202ENST00000378362 NUCB1Q02818 461 aa26.55■■□□□ 1.84
GFRA3-202ENST00000378362 SAP30BPQ9UHR5 308 aaKnown RBP26.55■■□□□ 1.84
GFRA3-202ENST00000378362 SLC10A3P09131 477 aa26.54■■□□□ 1.84
GFRA3-202ENST00000378362 MAP3K11Q16584 847 aa26.54■■□□□ 1.84
GFRA3-202ENST00000378362 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.54■■□□□ 1.84
GFRA3-202ENST00000378362 SLC10A4Q96EP9 437 aa26.54■■□□□ 1.84
GFRA3-202ENST00000378362 ELP3Q9H9T3 547 aa26.54■■□□□ 1.84
GFRA3-202ENST00000378362 TTC41PQ6P2S7 1318 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 PDE1AP54750 535 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 KIF23Q02241 960 aaPredicted RBP26.53■■□□□ 1.84
GFRA3-202ENST00000378362 CCDC102AQ96A19 550 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 WRNIP1Q96S55 665 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 OTOFQ9HC10 1997 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 ADD2P35612 726 aa26.53■■□□□ 1.84
GFRA3-202ENST00000378362 RIOK1Q9BRS2 568 aaKnown RBP26.53■■□□□ 1.84
GFRA3-202ENST00000378362 OSBPL5Q9H0X9 879 aaPredicted RBP26.53■■□□□ 1.84
GFRA3-202ENST00000378362 MAGEB6P1A0A0J9YX57 407 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 HSPA1AP0DMV8 641 aaKnown RBP26.52■■□□□ 1.84
GFRA3-202ENST00000378362 HSPA1BP0DMV9 641 aaKnown RBP26.52■■□□□ 1.84
GFRA3-202ENST00000378362 INPP5BP32019 993 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 VGLL4Q14135 290 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 LCORLQ8N3X6 602 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 ARMT1Q9H993 441 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 PALD1Q9ULE6 856 aa26.52■■□□□ 1.84
GFRA3-202ENST00000378362 FLT1P17948 1338 aa26.51■■□□□ 1.84
GFRA3-202ENST00000378362 ERC2O15083 957 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.51■■□□□ 1.83
GFRA3-202ENST00000378362 TSKSQ9UJT2 592 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 MYH7P12883 1935 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 GLRX3O76003 335 aaKnown RBP26.51■■□□□ 1.83
GFRA3-202ENST00000378362 MAP3K9P80192 1104 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 NOGQ13253 232 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 ANKRD13AQ8IZ07 590 aa26.51■■□□□ 1.83
GFRA3-202ENST00000378362 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.51■■□□□ 1.83
GFRA3-202ENST00000378362 RPAP1Q9BWH6 1393 aaPredicted RBP26.5■■□□□ 1.83
GFRA3-202ENST00000378362 PLCG2P16885 1265 aa26.5■■□□□ 1.83
GFRA3-202ENST00000378362 GJA5P36382 358 aa26.5■■□□□ 1.83
GFRA3-202ENST00000378362 KBTBD3Q8NAB2 608 aa26.5■■□□□ 1.83
GFRA3-202ENST00000378362 PUS7LQ9H0K6 701 aaKnown RBP26.5■■□□□ 1.83
GFRA3-202ENST00000378362 PRKAB2O43741 272 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 USP5P45974 858 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 SDR42E1Q8WUS8 393 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 ATRNL1Q5VV63 1379 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 MBD4O95243 580 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 MAP2K2P36507 400 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 EVX2Q03828 476 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 DCAF15Q66K64 600 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 ZNF341Q9BYN7 854 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 STAP2Q9UGK3 403 aa26.49■■□□□ 1.83
GFRA3-202ENST00000378362 PLEKHM2Q8IWE5 1019 aa26.48■■□□□ 1.83
GFRA3-202ENST00000378362 WBP1LQ9NX94 342 aa26.48■■□□□ 1.83
GFRA3-202ENST00000378362 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.48■■□□□ 1.83
GFRA3-202ENST00000378362 SPRYD7Q5W111 196 aa26.47■■□□□ 1.83
GFRA3-202ENST00000378362 PDE4AP27815 886 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 OPTNQ96CV9 577 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 WNK4Q96J92 1243 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 CSADQ9Y600 493 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 SNCAIPQ9Y6H5 919 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 FOXN1O15353 648 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 FSD1Q9BTV5 496 aa26.46■■□□□ 1.83
GFRA3-202ENST00000378362 NPM3O75607 178 aaKnown RBP26.45■■□□□ 1.82
GFRA3-202ENST00000378362 UBE3CQ15386 1083 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 SKAP1Q86WV1 359 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 OSBP2Q969R2 916 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 HOOK2Q96ED9 719 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 OTUD5Q96G74 571 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 SEC62Q99442 399 aaKnown RBP26.45■■□□□ 1.82
GFRA3-202ENST00000378362 FOCADQ5VW36 1801 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 MYH1P12882 1939 aa26.45■■□□□ 1.82
GFRA3-202ENST00000378362 PHF20L1A8MW92 1017 aa26.44■■□□□ 1.82
GFRA3-202ENST00000378362 IGSF3O75054 1194 aa26.44■■□□□ 1.82
GFRA3-202ENST00000378362 MAP2K1Q02750 393 aaPredicted RBP26.44■■□□□ 1.82
GFRA3-202ENST00000378362 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.44■■□□□ 1.82
GFRA3-202ENST00000378362 RNF113AO15541 343 aaKnown RBP26.44■■□□□ 1.82
GFRA3-202ENST00000378362 RRP1BQ14684 758 aaKnown RBP26.44■■□□□ 1.82
GFRA3-202ENST00000378362 CCDC84Q86UT8 332 aaPredicted RBP26.44■■□□□ 1.82
GFRA3-202ENST00000378362 CRNKL1Q9BZJ0 848 aaKnown RBP26.43■■□□□ 1.82
GFRA3-202ENST00000378362 ZNF112Q9UJU3 913 aa26.43■■□□□ 1.82
GFRA3-202ENST00000378362 TRIM6-TRIM34B2RNG4 842 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 SMIM22K7EJ46 135 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 SHROOM1Q2M3G4 852 aaPredicted RBP26.42■■□□□ 1.82
GFRA3-202ENST00000378362 ZSCAN25Q6NSZ9 544 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 AIDAQ96BJ3 306 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 THSD7BQ9C0I4 1608 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 SIPA1L1O43166 1804 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 BAZ2AQ9UIF9 1905 aaKnown RBP26.42■■□□□ 1.82
GFRA3-202ENST00000378362 M0R2C6 588 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 DNAJC18Q9H819 358 aa26.42■■□□□ 1.82
GFRA3-202ENST00000378362 CYP2D6P10635 497 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms