RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TPM1P09493 284 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 TRIM65Q6PJ69 517 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 WDR19Q8NEZ3 1342 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 TSPYL1Q9H0U9 437 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 RIC1Q4ADV7 1423 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 EFCAB8A8MWE9 144 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 B4E1Z4 1266 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 TADA3O75528 432 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 CDC27P30260 824 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 FANCCQ00597 558 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 NCAPHQ15003 741 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 COL22A1Q8NFW1 1626 aaPredicted RBP19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 ABCC12Q96J65 1359 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 ZMYM6O95789 1325 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 KRT40Q6A162 431 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 GIGYF2Q6Y7W6 1299 aaKnown RBP19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 MICU3Q86XE3 530 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 TXLNBQ8N3L3 684 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 INCENPQ9NQS7 918 aa19.08■□□□□ 0.65
PCDHA1-201ENST00000378133 ATP8B1O43520 1251 aa19.08■□□□□ 0.64
PCDHA1-201ENST00000378133 SYKP43405 635 aa19.08■□□□□ 0.64
PCDHA1-201ENST00000378133 EVA1CP58658 441 aa19.08■□□□□ 0.64
PCDHA1-201ENST00000378133 RAD51AP2Q09MP3 1159 aa19.08■□□□□ 0.64
PCDHA1-201ENST00000378133 COL16A1Q07092 1604 aaPredicted RBP19.08■□□□□ 0.64
PCDHA1-201ENST00000378133 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 MYH7P12883 1935 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 SH2B2O14492 632 aaPredicted RBP19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 GNL2Q13823 731 aaKnown RBP19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 APOA5Q6Q788 366 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 NLRP10Q86W26 655 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 PIGBQ92521 554 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 AKAP11Q9UKA4 1901 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 MAP3K15Q6ZN16 1313 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 ANKRD18BA2A2Z9 1011 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 ZCCHC17Q9NP64 241 aaKnown RBP19.07■□□□□ 0.64
PCDHA1-201ENST00000378133 PHKA1P46020 1223 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 ST5P78524 1137 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 MYL10Q9BUA6 226 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 PAPPAQ13219 1627 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 STARD3NLO95772 234 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 ATP1A3P13637 1013 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 TTF1Q15361 905 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 SHC4Q6S5L8 630 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 WWC3Q9ULE0 1092 aa19.06■□□□□ 0.64
PCDHA1-201ENST00000378133 UBE2Q2LH0YL09 131 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 FANCGO15287 622 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 CTSWP56202 376 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 UBE3CQ15386 1083 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 CCDC102BQ68D86 513 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 NFXL1Q6ZNB6 911 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 VGLL2Q8N8G2 317 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 CLIC6Q96NY7 704 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 EPC1Q9H2F5 836 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 FEZ2Q9UHY8 353 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 PARP3Q9Y6F1 533 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 MYO5AQ9Y4I1 1855 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 CDKL5O76039 1030 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 PDE8BO95263 885 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 OAS2P29728 719 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 UBASH3AP57075 661 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 GPS2Q13227 327 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 CPLX2Q6PUV4 134 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 REXO1L1PQ8IX06 675 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 FAM177A1Q8N128 213 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 TRIM34Q9BYJ4 488 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 UBXN6Q9BZV1 441 aa19.05■□□□□ 0.64
PCDHA1-201ENST00000378133 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 IRS4O14654 1257 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 ZBTB43O43298 467 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 SASH3O75995 380 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 SERPINC1P01008 464 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 PDE6AP16499 860 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 PTPAQ15257 358 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 KRBA2Q6ZNG9 492 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 C4AP0C0L4 1744 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 C4BP0C0L5 1744 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 IKBKBO14920 756 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 IARSP41252 1262 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 PNOCQ13519 176 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 SMC1AQ14683 1233 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 ZNF512BQ96KM6 892 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 TRMT112Q9UI30 125 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 HPSEQ9Y251 543 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 CDHR2Q9BYE9 1310 aa19.04■□□□□ 0.64
PCDHA1-201ENST00000378133 ZSCAN12O43309 604 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 PPP6R2O75170 966 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 CC2D1AQ6P1N0 951 aaPredicted RBP19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 AIDAQ96BJ3 306 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 HSD3B7Q9H2F3 369 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 TMX1Q9H3N1 280 aa19.03■□□□□ 0.64
PCDHA1-201ENST00000378133 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms