RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 PARP4Q9UKK3 1724 aaKnown RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 UBAP1LF5GYI3 381 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 HIP1RO75146 1068 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 FAM160A1Q05DH4 1040 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 CAPRIN2Q6IMN6 1127 aaKnown RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 ZNF530Q6P9A1 599 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 ARHGEF25Q86VW2 580 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 STAG1Q8WVM7 1258 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 KIF2CQ99661 725 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 SOS2Q07890 1332 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 EPS15P42566 896 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 NAIF1Q69YI7 327 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 TOM1L2Q6ZVM7 507 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 KDRP35968 1356 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 ERICH2A1L162 156 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 PPP1R12BO60237 982 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 CIB2O75838 187 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 SPAG1Q07617 926 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 EP400NLQ6ZTU2 488 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 RGPD1P0DJD0 1748 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 ROBO1Q9Y6N7 1651 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 DNAJC8O75937 253 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 DNA2P51530 1060 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 CCDC57Q2TAC2 916 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 TTC19Q6DKK2 380 aaPredicted RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 CCDC170Q8IYT3 715 aa4.57□□□□□ -1.68
PTAR1-202ENST00000377200 PRPF38AQ8NAV1 312 aaKnown RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 NOP53Q9NZM5 478 aaKnown RBP4.57□□□□□ -1.68
PTAR1-202ENST00000377200 TRIM27P14373 513 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PPP1R13BQ96KQ4 1090 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CDCA7Q9BWT1 371 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PARD6BQ9BYG5 372 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 BATF3Q9NR55 127 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 SAMM50Q9Y512 469 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 MARF1Q9Y4F3 1742 aaKnown RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PHLPP2Q6ZVD8 1323 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CCDC63Q8NA47 563 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.56□□□□□ -1.687e-7■■□□□ 11.5
PTAR1-202ENST00000377200 TSPYL4Q9UJ04 414 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CASQ2O14958 399 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 SNUPNO95149 360 aaKnown RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 HPDP32754 393 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 TNNC1P63316 161 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 ETAA1Q9NY74 926 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CDKL5O76039 1030 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 ACTN3Q08043 901 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 SSH1Q8WYL5 1049 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 LARP6Q9BRS8 491 aaKnown RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 GUCA1BQ9UMX6 200 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PEAK1Q9H792 1746 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PXDNQ92626 1479 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CTIFO43310 598 aaKnown RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 RAB11FIP3O75154 756 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 TMED8Q6PL24 325 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 LRRC8AQ8IWT6 810 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 TTC5Q8N0Z6 440 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 HAUS1Q96CS2 278 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PLEKHF1Q96S99 279 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 ESYT1Q9BSJ8 1104 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 ZNF521Q96K83 1311 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 COL14A1Q05707 1796 aaKnown RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 KRT86O43790 486 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 FANCCQ00597 558 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 LRRC45Q96CN5 670 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 SMC6Q96SB8 1091 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PSD3Q9NYI0 1048 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CEP131Q9UPN4 1083 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 OVOS2A0A0G2JMS6 1433 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 RGPD2P0DJD1 1756 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 RFC1P35251 1148 aaPredicted RBP4.56□□□□□ -1.68
PTAR1-202ENST00000377200 MYL5Q02045 173 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CCDC102BQ68D86 513 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PHLDB3Q6NSJ2 640 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 SRGAP1Q7Z6B7 1085 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 TRIM58Q8NG06 486 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 IFT81Q8WYA0 676 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 CFAP57Q96MR6 1250 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 EYA1Q99502 592 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 TNNQ9UQP3 1299 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 USH1CQ9Y6N9 552 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PARP9Q8IXQ6 854 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 PAF1Q8N7H5 531 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 RPGRIP1Q96KN7 1286 aa4.56□□□□□ -1.68
PTAR1-202ENST00000377200 FLOT1O75955 427 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 SDSP20132 328 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 SF3B2Q13435 895 aaKnown RBP4.55□□□□□ -1.68
PTAR1-202ENST00000377200 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 RUFY4Q6ZNE9 571 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 SPDL1Q96EA4 605 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 TAOK3Q9H2K8 898 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 IL1RAPL2Q9NP60 686 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 AHDC1Q5TGY3 1603 aaPredicted RBP4.55□□□□□ -1.68
PTAR1-202ENST00000377200 VIMP08670 466 aaKnown RBP4.55□□□□□ -1.68
PTAR1-202ENST00000377200 AIMP1Q12904 312 aaKnown RBP4.55□□□□□ -1.68
PTAR1-202ENST00000377200 MAP7D1Q3KQU3 841 aa4.55□□□□□ -1.68
PTAR1-202ENST00000377200 AKAP4Q5JQC9 854 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms