RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SMC5Q8IY18 1101 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.045e-6■■■□□ 17
GPC6-201ENST00000377047 RPS8P62241 208 aaKnown RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 SMCR8Q8TEV9 937 aaPredicted RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 TRIM6Q9C030 488 aaPredicted RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 ARHGEF35A5YM69 484 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 PAIP2Q9BPZ3 127 aaKnown RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 MYL10Q9BUA6 226 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 NCOA5Q9HCD5 579 aaKnown RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 DISP1Q96F81 1524 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 A0A1B0GVL5 298 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 KIFC2Q96AC6 838 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 CBX1P83916 185 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 AZI2Q9H6S1 392 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 DNAI1Q9UI46 699 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 PDE4DQ08499 809 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 FLAD1Q8NFF5 587 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 GLT8D2Q9H1C3 349 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 QTRT2Q9H974 415 aaKnown RBP15.32■□□□□ 0.04
GPC6-201ENST00000377047 ELP1O95163 1332 aa15.32■□□□□ 0.04
GPC6-201ENST00000377047 PHKG2P15735 406 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 PODXL2Q9NZ53 605 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 CFBP00751 764 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 CSADQ9Y600 493 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 ATP6V0A2Q9Y487 856 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 KRT86O43790 486 aa15.31■□□□□ 0.04
GPC6-201ENST00000377047 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.048e-8■■■■■ 28.4
GPC6-201ENST00000377047 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
GPC6-201ENST00000377047 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
GPC6-201ENST00000377047 TRPC3Q13507 836 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 DOK7Q18PE1 504 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 IBTKQ9P2D0 1353 aaPredicted RBP15.3■□□□□ 0.04
GPC6-201ENST00000377047 CTAGE9A4FU28 777 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 DPY19L2Q6NUT2 758 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
GPC6-201ENST00000377047 ATP2A1O14983 1001 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 SLC8A3P57103 927 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 CAPZA3Q96KX2 299 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 IFNKQ9P0W0 207 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 GUCA1BQ9UMX6 200 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 PLEKHG3A1L390 1219 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 TFAP4Q01664 338 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 KRT9P35527 623 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 CCDC63Q8NA47 563 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 RNF34Q969K3 372 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 PAGR1Q9BTK6 254 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 CALUO43852 315 aaPredicted RBP15.29■□□□□ 0.04
GPC6-201ENST00000377047 STX10O60499 249 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
GPC6-201ENST00000377047 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 NOC4LQ9BVI4 516 aaKnown RBP15.29■□□□□ 0.04
GPC6-201ENST00000377047 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
GPC6-201ENST00000377047 KCNQ3O43525 872 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 KIFAP3Q92845 792 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 KARSQ15046 597 aaKnown RBP15.28■□□□□ 0.04
GPC6-201ENST00000377047 NONOQ15233 471 aaKnown RBP eCLIP15.28■□□□□ 0.04
GPC6-201ENST00000377047 CCDC77Q9BR77 488 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 LUC7L2Q9Y383 392 aaKnown RBP15.28■□□□□ 0.04
GPC6-201ENST00000377047 TNFAIP1Q13829 316 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 PHKBQ93100 1093 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 CEP63Q96MT8 703 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 AS3MTQ9HBK9 375 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 TRPC5Q9UL62 973 aaPredicted RBP15.28■□□□□ 0.04
GPC6-201ENST00000377047 AOX1Q06278 1338 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 M0QZ92 97 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 SCNN1DP51172 638 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 ATL3Q6DD88 541 aa15.28■□□□□ 0.04
GPC6-201ENST00000377047 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
GPC6-201ENST00000377047 DIS3L2Q8IYB7 885 aaKnown RBP15.27■□□□□ 0.04
GPC6-201ENST00000377047 NDC80O14777 642 aa15.27■□□□□ 0.04
GPC6-201ENST00000377047 TTLL7Q6ZT98 887 aa15.27■□□□□ 0.04
GPC6-201ENST00000377047 KRT25Q7Z3Z0 450 aa15.27■□□□□ 0.04
GPC6-201ENST00000377047 SNX29Q8TEQ0 813 aa15.27■□□□□ 0.04
GPC6-201ENST00000377047 CCDC114Q96M63 670 aa15.27■□□□□ 0.04
GPC6-201ENST00000377047 LZTS2Q9BRK4 669 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms