RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SBF1O95248 1867 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 COL4A5P29400 1685 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 BBOX1O75936 387 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 NAPBQ9H115 298 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 USP25Q9UHP3 1055 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 AKAP11Q9UKA4 1901 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
HMGCL-202ENST00000374487 GPSM2P81274 684 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 PLCB2Q00722 1185 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 TBC1D10CQ8IV04 446 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 C8orf76Q96K31 380 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 NBPF3Q9H094 633 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
HMGCL-202ENST00000374487 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
HMGCL-202ENST00000374487 NR1I2O75469 434 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 MBD4O95243 580 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 FDPSP14324 419 aaKnown RBP14.1□□□□□ -0.15
HMGCL-202ENST00000374487 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
HMGCL-202ENST00000374487 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 SP8Q8IXZ3 490 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 CKAP2LQ8IYA6 745 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 ORC3Q9UBD5 711 aaPredicted RBP14.1□□□□□ -0.15
HMGCL-202ENST00000374487 RCOR1Q9UKL0 485 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 CCDC88AQ3V6T2 1871 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 KDM4AO75164 1064 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 ALX1Q15699 326 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 ANKRD18AQ8IVF6 992 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 RTKN2Q8IZC4 609 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 IFNL3Q8IZI9 196 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 CLSTN2Q9H4D0 955 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 ARMT1Q9H993 441 aa14.1□□□□□ -0.15
HMGCL-202ENST00000374487 B4E1Z4 1266 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 ADCY5O95622 1261 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 AOC3Q16853 763 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 MYH7P12883 1935 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 GNAT2P19087 354 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 TYRO3Q06418 890 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
HMGCL-202ENST00000374487 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 CYB5R4Q7L1T6 521 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 MPNDQ8N594 471 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
HMGCL-202ENST00000374487 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
HMGCL-202ENST00000374487 NMRK2Q9NPI5 230 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 GNL3LQ9NVN8 582 aaKnown RBP14.09□□□□□ -0.15
HMGCL-202ENST00000374487 DENND2AQ9ULE3 1009 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
HMGCL-202ENST00000374487 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
HMGCL-202ENST00000374487 ME1P48163 572 aa14.08□□□□□ -0.16
HMGCL-202ENST00000374487 METAP2P50579 478 aaKnown RBP eCLIP14.08□□□□□ -0.16
HMGCL-202ENST00000374487 CPLX2Q6PUV4 134 aaKnown RBP14.08□□□□□ -0.16
HMGCL-202ENST00000374487 SASS6Q6UVJ0 657 aa14.08□□□□□ -0.16
HMGCL-202ENST00000374487 LTBP3Q9NS15 1303 aa14.08□□□□□ -0.16
HMGCL-202ENST00000374487 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CDKL5O76039 1030 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
HMGCL-202ENST00000374487 TDO2P48775 406 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
HMGCL-202ENST00000374487 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 IQSEC3Q9UPP2 1182 aaPredicted RBP14.07□□□□□ -0.16
HMGCL-202ENST00000374487 SLC4A4Q9Y6R1 1079 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 DUOX1Q9NRD9 1551 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CTDSPL2Q05D32 466 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CAVIN4Q5BKX8 364 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CCDC73Q6ZRK6 1079 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 FAM200AQ8TCP9 573 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 PSMD1Q99460 953 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 CNNM2Q9H8M5 875 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 EPB41L4AQ9HCS5 686 aaPredicted RBP14.07□□□□□ -0.16
HMGCL-202ENST00000374487 NEDD4P46934 1319 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 ZNF541Q9H0D2 1346 aa14.07□□□□□ -0.16
HMGCL-202ENST00000374487 GSG1L2A8MUP6 293 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 DDNO94850 711 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 POLR3DP05423 398 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 MIGA1Q8NAN2 632 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 KRT23Q9C075 422 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 INCENPQ9NQS7 918 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 TOMM22Q9NS69 142 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 BSDC1Q9NW68 430 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 MINPP1Q9UNW1 487 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 C6orf229H3BNL8 230 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 ZBTB43O43298 467 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms