RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SSRP1Q08945 709 aaKnown RBP19.35■□□□□ 0.69
HDAC8-206ENST00000373571 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
HDAC8-206ENST00000373571 BPIFA3Q9BQP9 254 aa19.35■□□□□ 0.69
HDAC8-206ENST00000373571 SLC26A6Q9BXS9 759 aa19.35■□□□□ 0.69
HDAC8-206ENST00000373571 MYH14Q7Z406 1995 aaKnown RBP19.35■□□□□ 0.69
HDAC8-206ENST00000373571 U2AF2P26368 475 aaKnown RBP eCLIP19.34■□□□□ 0.69
HDAC8-206ENST00000373571 RRP12Q5JTH9 1297 aaKnown RBP19.34■□□□□ 0.69
HDAC8-206ENST00000373571 JMYQ8N9B5 988 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 TOMM22Q9NS69 142 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 THRAP3Q9Y2W1 955 aaKnown RBP19.34■□□□□ 0.69
HDAC8-206ENST00000373571 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 NEMFO60524 1076 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 NLRP12P59046 1061 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 PTPAQ15257 358 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
HDAC8-206ENST00000373571 TSC1Q92574 1164 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 MAP3K14Q99558 947 aa19.34■□□□□ 0.69
HDAC8-206ENST00000373571 NID2Q14112 1375 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 UBE2Q2LH0YL09 131 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 BIN1O00499 593 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 ADAMTS2O95450 1211 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 FMNL1O95466 1100 aaPredicted RBP19.33■□□□□ 0.69
HDAC8-206ENST00000373571 SYKP43405 635 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 RBM6P78332 1123 aaKnown RBP19.33■□□□□ 0.69
HDAC8-206ENST00000373571 ARID5BQ14865 1188 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 UBE2Q2Q8WVN8 375 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 C16orf45Q96MC5 204 aaPredicted RBP19.33■□□□□ 0.69
HDAC8-206ENST00000373571 TIGD1Q96MW7 591 aa19.33■□□□□ 0.69
HDAC8-206ENST00000373571 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.33■□□□□ 0.69
HDAC8-206ENST00000373571 RIOK3O14730 519 aaKnown RBP19.33■□□□□ 0.68
HDAC8-206ENST00000373571 SART3Q15020 963 aaKnown RBP19.33■□□□□ 0.68
HDAC8-206ENST00000373571 FILIP1Q7Z7B0 1213 aa19.33■□□□□ 0.68
HDAC8-206ENST00000373571 ZKSCAN3Q9BRR0 538 aa19.33■□□□□ 0.68
HDAC8-206ENST00000373571 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.68
HDAC8-206ENST00000373571 IFNAR1P17181 557 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 WTAPQ15007 396 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 SHC4Q6S5L8 630 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 STK11IPQ8N1F8 1099 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 WASF1Q92558 559 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 HPSEQ9Y251 543 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 BCL9LQ86UU0 1499 aa19.32■□□□□ 0.68
HDAC8-206ENST00000373571 COL4A1P02462 1669 aa19.31■□□□□ 0.68
HDAC8-206ENST00000373571 ERICH2A1L162 156 aa19.31■□□□□ 0.68
HDAC8-206ENST00000373571 RTN1Q16799 776 aa19.31■□□□□ 0.68
HDAC8-206ENST00000373571 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
HDAC8-206ENST00000373571 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-206ENST00000373571 TPD52L1Q16890 204 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-206ENST00000373571 RESP18Q5W5W9 173 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 ZNF652Q9Y2D9 606 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 TNNT1P13805 278 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 CYP7A1P22680 504 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 TPM4P67936 248 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 TRIM22Q8IYM9 498 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 ZNF710Q8N1W2 664 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
HDAC8-206ENST00000373571 RNF41Q9H4P4 317 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-206ENST00000373571 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
HDAC8-206ENST00000373571 FAM237AA0A1B0GTK4 181 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 SKILP12757 684 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 PPARAQ07869 468 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 ADGRA1Q86SQ6 560 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 NOSTRINQ8IVI9 506 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 MTA3Q9BTC8 594 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
HDAC8-206ENST00000373571 SMTNL1A8MU46 457 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 CUTAO60888 179 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 MMP1P03956 469 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 SAFBQ15424 915 aaKnown RBP eCLIP19.28■□□□□ 0.68
HDAC8-206ENST00000373571 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 TUBE1Q9UJT0 475 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 A0A1B0GUL6 1792 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 ZNF804BA4D1E1 1349 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 SMC2O95347 1197 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 GSDMDP57764 484 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 CCZ1BP86790 482 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 CCZ1P86791 482 aaPredicted RBP19.28■□□□□ 0.68
HDAC8-206ENST00000373571 NCAPHQ15003 741 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 ISM2Q6H9L7 571 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 TMTC2Q8N394 836 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 XPO4Q9C0E2 1151 aaKnown RBP19.28■□□□□ 0.68
HDAC8-206ENST00000373571 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
HDAC8-206ENST00000373571 BTBD18B2RXH4 712 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 GYG1P46976 350 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 ANKRD18AQ8IVF6 992 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 DIS3L2Q8IYB7 885 aaKnown RBP19.27■□□□□ 0.68
HDAC8-206ENST00000373571 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
HDAC8-206ENST00000373571 IFNKQ9P0W0 207 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 IMPACTQ9P2X3 320 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 KCNJ14Q9UNX9 436 aa19.27■□□□□ 0.68
HDAC8-206ENST00000373571 COL5A3P25940 1745 aaPredicted RBP19.27■□□□□ 0.68
HDAC8-206ENST00000373571 MAGEB6P1A0A0J9YX57 407 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 CCDC196A0A1B0GTZ2 297 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.67
HDAC8-206ENST00000373571 ERFEQ4G0M1 354 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms