RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
VPS26A-202ENST00000373382 H7C1W4 665 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 RHOXF2BP0C7M4 288 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 AFMP43652 599 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 GPR161Q8N6U8 529 aaKnown RBP20.34■□□□□ 0.85
VPS26A-202ENST00000373382 RHOXF2Q9BQY4 288 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 CYP27B1O15528 508 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 ZBTB43O43298 467 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 CASP1P29466 404 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 ZSCAN26Q16670 478 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 APPBP2Q92624 585 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 GOLGA1Q92805 767 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 C19orf44Q9H6X5 657 aa20.33■□□□□ 0.85
VPS26A-202ENST00000373382 MRPL44Q9H9J2 332 aaKnown RBP20.33■□□□□ 0.85
VPS26A-202ENST00000373382 VPS18Q9P253 973 aa20.33■□□□□ 0.84
VPS26A-202ENST00000373382 TMEM67Q5HYA8 995 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 TC2NQ8N9U0 490 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 SUGCTQ9HAC7 445 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 MAP3K9P80192 1104 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 PTPAQ15257 358 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 LONRF2Q1L5Z9 754 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 KIF4BQ2VIQ3 1234 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 TMEM139Q8IV31 216 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 MAN1B1Q9UKM7 699 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 APOA5Q6Q788 366 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 MRFAP1Q9Y605 127 aa20.32■□□□□ 0.84
VPS26A-202ENST00000373382 CDKL5O76039 1030 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 POSTNQ15063 836 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 ZNF569Q5MCW4 686 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 RESP18Q5W5W9 173 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
VPS26A-202ENST00000373382 HPSEQ9Y251 543 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 TEX33O43247 280 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 METTL24Q5JXM2 366 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 HOOK1Q9UJC3 728 aaKnown RBP20.31■□□□□ 0.84
VPS26A-202ENST00000373382 IFIT3O14879 490 aaKnown RBP20.31■□□□□ 0.84
VPS26A-202ENST00000373382 CHMP4BP1P59074 171 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 USP49Q70CQ1 688 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 PPFIBP1Q86W92 1011 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 NUP133Q8WUM0 1156 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 STAMQ92783 540 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.31■□□□□ 0.84
VPS26A-202ENST00000373382 PDE11AQ9HCR9 933 aa20.31■□□□□ 0.84
VPS26A-202ENST00000373382 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
VPS26A-202ENST00000373382 TRIM66O15016 1216 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 GUCY1A2P33402 732 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
VPS26A-202ENST00000373382 SMYD4Q8IYR2 804 aaPredicted RBP20.3■□□□□ 0.84
VPS26A-202ENST00000373382 ADAM21Q9UKJ8 722 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 CTDSPL2Q05D32 466 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 AK7Q96M32 723 aa20.3■□□□□ 0.84
VPS26A-202ENST00000373382 H3BQF6 201 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 STX10O60499 249 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 CUTAO60888 179 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 PPP6R2O75170 966 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 NR5A1Q13285 461 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 RAI14Q9P0K7 980 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 SLC12A7Q9Y666 1083 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 CCDC175P0C221 793 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 PDE4CQ08493 712 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 JAKMIP3Q5VZ66 844 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 DIS3L2Q8IYB7 885 aaKnown RBP20.29■□□□□ 0.84
VPS26A-202ENST00000373382 CCDC102AQ96A19 550 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 NFAT5O94916 1531 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 RANBP6O60518 1105 aaKnown RBP20.29■□□□□ 0.84
VPS26A-202ENST00000373382 ZFYP08048 801 aaPredicted RBP20.29■□□□□ 0.84
VPS26A-202ENST00000373382 GPTP24298 496 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
VPS26A-202ENST00000373382 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 FUT8Q9BYC5 575 aa20.29■□□□□ 0.84
VPS26A-202ENST00000373382 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
VPS26A-202ENST00000373382 LCMT1Q9UIC8 334 aa20.28■□□□□ 0.84
VPS26A-202ENST00000373382 hCG_1642624A0A1W2PR95 340 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 GOLGA6L9A6NEM1 432 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 AKR1B15C9JRZ8 316 aaPredicted RBP20.27■□□□□ 0.84
VPS26A-202ENST00000373382 KIF5CO60282 957 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 TXLNAP40222 546 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 IGSF22Q8N9C0 903 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
VPS26A-202ENST00000373382 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.27■□□□□ 0.843e-6■□□□□ 9
VPS26A-202ENST00000373382 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 AKAP2Q9Y2D5 859 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 N4BP1O75113 896 aaKnown RBP20.27■□□□□ 0.84
VPS26A-202ENST00000373382 CCT6AP40227 531 aaKnown RBP20.27■□□□□ 0.84
VPS26A-202ENST00000373382 RABGGTAQ92696 567 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 CNNM1Q9NRU3 951 aa20.27■□□□□ 0.84
VPS26A-202ENST00000373382 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
VPS26A-202ENST00000373382 ANKRD65E5RJM6 399 aa20.27■□□□□ 0.83
VPS26A-202ENST00000373382 PES1O00541 588 aaKnown RBP20.27■□□□□ 0.83
VPS26A-202ENST00000373382 RBL2Q08999 1139 aa20.27■□□□□ 0.83
VPS26A-202ENST00000373382 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.83
VPS26A-202ENST00000373382 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.83
VPS26A-202ENST00000373382 NBPF3Q9H094 633 aa20.27■□□□□ 0.83
VPS26A-202ENST00000373382 PCDHB6Q9Y5E3 794 aa20.27■□□□□ 0.83
VPS26A-202ENST00000373382 UBN2Q6ZU65 1347 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms