RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 ARMC2Q8NEN0 867 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 CABLES1Q8TDN4 633 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 FAM227BQ96M60 508 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 GOLGA6AQ9NYA3 693 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 MPHOSPH10O00566 681 aaKnown RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 PDHBP11177 359 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 ATP7BP35670 1465 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 CCDC175P0C221 793 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 TUBB2AQ13885 445 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 POLA2Q14181 598 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 ZNF569Q5MCW4 686 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 NAA16Q6N069 864 aaPredicted RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 RAD9BQ6WBX8 426 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 YTHDF3Q7Z739 585 aaKnown RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
SF3A3-201ENST00000373019 PDILTQ8N807 584 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 TUBB2BQ9BVA1 445 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 VCPKMTQ9H867 229 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 KIF9Q9HAQ2 790 aa10.86□□□□□ -0.67
SF3A3-201ENST00000373019 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 AP1G2O75843 785 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
SF3A3-201ENST00000373019 MYL5Q02045 173 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CEP85LQ5SZL2 805 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 SH3GL3Q99963 347 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 MIS18AQ9NYP9 233 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CTDNEP1O95476 244 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3A3-201ENST00000373019 FOSBP53539 338 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 ICA1Q05084 483 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CCDC40Q4G0X9 1142 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 AP1ARQ63HQ0 302 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CDCA2Q69YH5 1023 aaPredicted RBP10.85□□□□□ -0.67
SF3A3-201ENST00000373019 NCAPH2Q6IBW4 605 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 PARD3BQ8TEW8 1205 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 THOC1Q96FV9 657 aaKnown RBP10.85□□□□□ -0.67
SF3A3-201ENST00000373019 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
SF3A3-201ENST00000373019 AMPD2Q01433 879 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 ATL3Q6DD88 541 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 PPP1R42Q7Z4L9 355 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 CCDC13Q8IYE1 715 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 SLC35F6Q8N357 371 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
SF3A3-201ENST00000373019 A0A1B0GUA9 196 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 CAND2O75155 1236 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 WHAMMP3Q1A5X7 153 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 SEC62Q99442 399 aaKnown RBP10.84□□□□□ -0.67
SF3A3-201ENST00000373019 CDC5LQ99459 802 aaKnown RBP10.84□□□□□ -0.67
SF3A3-201ENST00000373019 PAGR1Q9BTK6 254 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 SNRKQ9NRH2 765 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 RPS6KL1Q9Y6S9 549 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 ARHGEF10O15013 1369 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 TECPR2O15040 1411 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 KIF5CO60282 957 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 GLRX3O76003 335 aaKnown RBP10.84□□□□□ -0.67
SF3A3-201ENST00000373019 AMPHP49418 695 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 USP14P54578 494 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 SPECC1LQ69YQ0 1117 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 LINC00301Q8NCQ3 95 aa10.84□□□□□ -0.67
SF3A3-201ENST00000373019 SPATS2LQ9NUQ6 558 aaKnown RBP10.84□□□□□ -0.67
SF3A3-201ENST00000373019 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.84□□□□□ -0.67
SF3A3-201ENST00000373019 HSP90AA4PQ58FG1 418 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 ANKRD18AQ8IVF6 992 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 MAB21L3Q8N8X9 362 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.67
SF3A3-201ENST00000373019 PLCD4Q9BRC7 762 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 NBPF3Q9H094 633 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.67
SF3A3-201ENST00000373019 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 ZNF396Q96N95 335 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-201ENST00000373019 LTBP4Q8N2S1 1624 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 A1BGP04217 495 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 ARHGAP25P42331 645 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 NMIQ13287 307 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-201ENST00000373019 SNX1Q13596 522 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
SF3A3-201ENST00000373019 MAGEC3Q8TD91 643 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
SF3A3-201ENST00000373019 CLIC4Q9Y696 253 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 DCCP43146 1447 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 CRB1P82279 1406 aa10.83□□□□□ -0.68
SF3A3-201ENST00000373019 KIAA0754O94854 1291 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 GCKP35557 465 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
SF3A3-201ENST00000373019 TEX13AQ9BXU3 409 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-201ENST00000373019 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
SF3A3-201ENST00000373019 TTC36A6NLP5 189 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms