RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 UVSSAQ2YD98 709 aa27.66■■■□□ 2.02
SNX21-204ENST00000372542 TDRD7Q8NHU6 1098 aaKnown RBP27.66■■■□□ 2.02
SNX21-204ENST00000372542 PGBD1Q96JS3 809 aa27.66■■■□□ 2.02
SNX21-204ENST00000372542 NUP62CLQ9H1M0 184 aa27.66■■■□□ 2.02
SNX21-204ENST00000372542 LIG1P18858 919 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 ATP2B4P23634 1241 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 CDC27P30260 824 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 BICD2Q8TD16 824 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 UBAC1Q9BSL1 405 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 ATP8A2Q9NTI2 1148 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 DUOX1Q9NRD9 1551 aa27.65■■■□□ 2.02
SNX21-204ENST00000372542 BBOX1O75936 387 aa27.64■■■□□ 2.02
SNX21-204ENST00000372542 RBM6P78332 1123 aaKnown RBP27.64■■■□□ 2.02
SNX21-204ENST00000372542 ZNF772Q68DY9 489 aaPredicted RBP27.64■■■□□ 2.02
SNX21-204ENST00000372542 ILDR1Q86SU0 546 aaPredicted RBP27.64■■■□□ 2.02
SNX21-204ENST00000372542 FGRP09769 529 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 PRDX5P30044 214 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 HOXA10P31260 410 aaPredicted RBP27.64■■■□□ 2.01
SNX21-204ENST00000372542 IARSP41252 1262 aaKnown RBP27.64■■■□□ 2.01
SNX21-204ENST00000372542 NTRK3Q16288 839 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 DZIP1Q86YF9 867 aaKnown RBP27.64■■■□□ 2.01
SNX21-204ENST00000372542 USP28Q96RU2 1077 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 ALG1Q9BT22 464 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 FUCA2Q9BTY2 467 aa27.64■■■□□ 2.01
SNX21-204ENST00000372542 BAZ2AQ9UIF9 1905 aaKnown RBP27.63■■■□□ 2.01
SNX21-204ENST00000372542 POLRMTO00411 1230 aaKnown RBP27.63■■■□□ 2.01
SNX21-204ENST00000372542 FAM217BQ9NTX9 383 aaPredicted RBP27.63■■■□□ 2.01
SNX21-204ENST00000372542 RTEL1Q9NZ71 1219 aa27.63■■■□□ 2.01
SNX21-204ENST00000372542 LAMB1P07942 1786 aa27.63■■■□□ 2.01
SNX21-204ENST00000372542 CCDC196A0A1B0GTZ2 297 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 MAP3K11Q16584 847 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 RNF214Q8ND24 703 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 WASF1Q92558 559 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 PDLIM2Q96JY6 352 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 CRAMP1Q96RY5 1269 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 DACT1Q9NYF0 836 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 KLRG2A4D1S0 409 aaPredicted RBP27.62■■■□□ 2.01
SNX21-204ENST00000372542 RXRAP19793 462 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 GSTO1P78417 241 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 DDR1Q08345 913 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 PPP2R5BQ15173 497 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 CTR9Q6PD62 1173 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 TMC4Q7Z404 712 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 PROM2Q8N271 834 aa27.62■■■□□ 2.01
SNX21-204ENST00000372542 PLSCR1O15162 318 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 LDHBP07195 334 aaKnown RBP27.61■■■□□ 2.01
SNX21-204ENST00000372542 IFNAR1P17181 557 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 GPSM2P81274 684 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 SSRP1Q08945 709 aaKnown RBP27.61■■■□□ 2.01
SNX21-204ENST00000372542 RTN1Q16799 776 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 OTUD7BQ6GQQ9 843 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 CLSTN2Q9H4D0 955 aa27.61■■■□□ 2.01
SNX21-204ENST00000372542 AATFQ9NY61 560 aaKnown RBP eCLIP27.61■■■□□ 2.01
SNX21-204ENST00000372542 SLC3A2P08195 630 aaKnown RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 CCDC192P0DO97 292 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 KIF23Q02241 960 aaPredicted RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 SBK1Q52WX2 424 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 ARPP21Q9UBL0 812 aaPredicted RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 GGA1Q9UJY5 639 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 ECM29Q5VYK3 1845 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 FMNL1O95466 1100 aaPredicted RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 NT5C2P49902 561 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 CEBPZQ03701 1054 aaKnown RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 TNMDQ9H2S6 317 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 DCP1AQ9NPI6 582 aaPredicted RBP27.6■■■□□ 2.01
SNX21-204ENST00000372542 PODXL2Q9NZ53 605 aa27.6■■■□□ 2.01
SNX21-204ENST00000372542 YEATS4O95619 227 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 TRIM29Q14134 588 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 SEC23AQ15436 765 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 CCDC144CPQ8IYA2 1237 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 ZKSCAN3Q9BRR0 538 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 MYL10Q9BUA6 226 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 POLR3EQ9NVU0 708 aa27.59■■■□□ 2.01
SNX21-204ENST00000372542 TNKSO95271 1327 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 USP17L12C9JPN9 530 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 USP17L21D6R901 530 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 ORC4O43929 436 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 RANBP6O60518 1105 aaKnown RBP27.58■■■□□ 2.01
SNX21-204ENST00000372542 UFL1O94874 794 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 MYSM1Q5VVJ2 828 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 RBM43Q6ZSC3 357 aaKnown RBP27.58■■■□□ 2.01
SNX21-204ENST00000372542 ZNF654Q8IZM8 581 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 PHKBQ93100 1093 aa27.58■■■□□ 2.01
SNX21-204ENST00000372542 DLEC1Q9Y238 1755 aa27.58■■■□□ 2
SNX21-204ENST00000372542 IQCA1Q86XH1 822 aa27.57■■■□□ 2
SNX21-204ENST00000372542 TRIM22Q8IYM9 498 aa27.57■■■□□ 2
SNX21-204ENST00000372542 STK11IPQ8N1F8 1099 aa27.57■■■□□ 2
SNX21-204ENST00000372542 ZSCAN10Q96SZ4 725 aaPredicted RBP27.57■■■□□ 2
SNX21-204ENST00000372542 LRRC37AA6NMS7 1700 aa27.57■■■□□ 2
SNX21-204ENST00000372542 MYH2Q9UKX2 1941 aa27.57■■■□□ 2
SNX21-204ENST00000372542 LDHCP07864 332 aa27.57■■■□□ 2
SNX21-204ENST00000372542 KRT40Q6A162 431 aa27.57■■■□□ 2
SNX21-204ENST00000372542 CERS3Q8IU89 383 aa27.57■■■□□ 2
SNX21-204ENST00000372542 KCNG4Q8TDN1 519 aa27.57■■■□□ 2
SNX21-204ENST00000372542 FTOQ9C0B1 505 aaKnown RBP eCLIP27.57■■■□□ 2
SNX21-204ENST00000372542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.57■■■□□ 2
SNX21-204ENST00000372542 HS1BP3Q53T59 392 aa27.56■■■□□ 2
SNX21-204ENST00000372542 NLGN1Q8N2Q7 840 aa27.56■■■□□ 2
SNX21-204ENST00000372542 SLC26A6Q9BXS9 759 aa27.56■■■□□ 2
SNX21-204ENST00000372542 NR1I2O75469 434 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms