RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.78
YIPF3-201ENST00000372417 PHAXQ9H814 394 aaKnown RBP10.15□□□□□ -0.78
YIPF3-201ENST00000372417 GJD2Q9UKL4 321 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 WDFY4Q6ZS81 3184 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 TRANK1O15050 2925 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 HDLBPQ00341 1268 aaKnown RBP10.14□□□□□ -0.79
YIPF3-201ENST00000372417 LHX8Q68G74 356 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 BADQ92934 168 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 ZNF576Q9H609 170 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 EPHX3Q9H6B9 360 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 PRDM5Q9NQX1 630 aaPredicted RBP10.14□□□□□ -0.79
YIPF3-201ENST00000372417 ATP11BQ9Y2G3 1177 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 LAS1LQ9Y4W2 734 aaKnown RBP10.14□□□□□ -0.79
YIPF3-201ENST00000372417 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
YIPF3-201ENST00000372417 MYH2Q9UKX2 1941 aa10.13□□□□□ -0.79
YIPF3-201ENST00000372417 CHL1O00533 1208 aa10.13□□□□□ -0.79
YIPF3-201ENST00000372417 DDX58O95786 925 aaKnown RBP10.13□□□□□ -0.79
YIPF3-201ENST00000372417 CYP2B6P20813 491 aa10.13□□□□□ -0.79
YIPF3-201ENST00000372417 ZHX2Q9Y6X8 837 aa10.13□□□□□ -0.79
YIPF3-201ENST00000372417 GPR37L1O60883 481 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 ZKSCAN1P17029 563 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 CCND3P30281 292 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 GCLCP48506 637 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 CACNB2Q08289 660 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 UBE3BQ7Z3V4 1068 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 FAM151AQ8WW52 585 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 TIFAQ96CG3 184 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 ZDHHC15Q96MV8 337 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
YIPF3-201ENST00000372417 PICK1Q9NRD5 415 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 AGTPBP1Q9UPW5 1226 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 AFG3L2Q9Y4W6 797 aa10.12□□□□□ -0.79
YIPF3-201ENST00000372417 ANKRD18BA2A2Z9 1011 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 IGKV5-2P06315 115 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
YIPF3-201ENST00000372417 BMP1P13497 986 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 GRIK5Q16478 980 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 DUSP27Q5VZP5 1158 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 SCYL3Q8IZE3 742 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 PLA2G12BQ9BX93 195 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
YIPF3-201ENST00000372417 MAP3K2Q9Y2U5 619 aa10.11□□□□□ -0.79
YIPF3-201ENST00000372417 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.1□□□□□ -0.79
YIPF3-201ENST00000372417 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.1□□□□□ -0.79
YIPF3-201ENST00000372417 FAM86C2PA6NEL3 165 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 PTPRAP18433 802 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 AAK1Q2M2I8 961 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 TREML2Q5T2D2 321 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 SOCS4Q8WXH5 440 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 PRDM12Q9H4Q4 367 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 PDLIM7Q9NR12 457 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 USP34Q70CQ2 3546 aa10.1□□□□□ -0.79
YIPF3-201ENST00000372417 MAST3O60307 1309 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 TRIM75PA6NK02 468 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 DNM1LO00429 736 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 PLIN1O60240 522 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 CSF1RP07333 972 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 IGFBP4P22692 258 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 HIBADHP31937 336 aaKnown RBP10.09□□□□□ -0.79
YIPF3-201ENST00000372417 TMPOP42166 694 aaKnown RBP10.09□□□□□ -0.79
YIPF3-201ENST00000372417 GYG1P46976 350 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 TCP10Q12799 353 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 APOBEC3HQ6NTF7 200 aaKnown RBP10.09□□□□□ -0.79
YIPF3-201ENST00000372417 TBC1D22AQ8WUA7 517 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 C11orf16Q9NQ32 467 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
YIPF3-201ENST00000372417 NEURL1BA8MQ27 555 aa10.08□□□□□ -0.8
YIPF3-201ENST00000372417 H7C1W4 665 aa10.08□□□□□ -0.8
YIPF3-201ENST00000372417 CHAF1AQ13111 956 aaPredicted RBP10.08□□□□□ -0.8
YIPF3-201ENST00000372417 PABPC4Q13310 644 aaKnown RBP eCLIP10.08□□□□□ -0.8
YIPF3-201ENST00000372417 CWF19L2Q2TBE0 894 aaKnown RBP10.08□□□□□ -0.8
YIPF3-201ENST00000372417 PROCA1Q8NCQ7 364 aaPredicted RBP10.08□□□□□ -0.8
YIPF3-201ENST00000372417 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
YIPF3-201ENST00000372417 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
YIPF3-201ENST00000372417 PRRC2BQ5JSZ5 2229 aaKnown RBP10.08□□□□□ -0.8
YIPF3-201ENST00000372417 CDK5RAP2Q96SN8 1893 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 TRIM43BA6NCK2 446 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 PHF20L1A8MW92 1017 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 SMIM22K7EJ46 135 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 MSCO60682 206 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 RGS2P41220 211 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 NHLH1Q02575 133 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 TFF2Q03403 129 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
YIPF3-201ENST00000372417 ADGRE1Q14246 886 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 CCL14Q16627 93 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 TRIM60Q495X7 471 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
YIPF3-201ENST00000372417 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms