RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MAN1A1P33908 653 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 LGSNQ5TDP6 509 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 ATF3P18847 181 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 MMEL1Q495T6 779 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
GTF3C4-201ENST00000372146 CDR2Q01850 454 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 RAB3GAP1Q15042 981 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
GTF3C4-201ENST00000372146 LONRF3Q496Y0 759 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 IRAK4Q9NWZ3 460 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 SYNJ1O43426 1573 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 SECISBP2LQ93073 1101 aaKnown RBP17■□□□□ 0.31
GTF3C4-201ENST00000372146 SLFN5Q08AF3 891 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 TRIM14Q14142 442 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 TTC22Q5TAA0 569 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 RMDN2Q96LZ7 410 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 TSPY2A6NKD2 308 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 ZNF280CQ8ND82 737 aa17■□□□□ 0.31
GTF3C4-201ENST00000372146 BAG5Q9UL15 447 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 IFIT1BQ5T764 474 aaKnown RBP16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 JADE1Q6IE81 842 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 SND1Q7KZF4 910 aaKnown RBP eCLIP16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 MCM10Q7L590 875 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 CCDC68Q9H2F9 335 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 JRKLQ9Y4A0 524 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 WBP4O75554 376 aaKnown RBP16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 KRT12Q99456 494 aa16.99■□□□□ 0.31
GTF3C4-201ENST00000372146 CALM1P0DP23 149 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 CALM2P0DP24 149 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 CALM3P0DP25 149 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 KCNA4P22459 653 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 SLC5A1P13866 664 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 RAB17Q9H0T7 212 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 MAP3K7O43318 606 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 WTAPQ15007 396 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 TAF11Q15544 211 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 GIMAP4Q9NUV9 329 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 MKL2Q9ULH7 1088 aa16.98■□□□□ 0.31
GTF3C4-201ENST00000372146 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 Q6ZUG5 572 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 CTAGE3PQ8IX95 158 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 NOC4LQ9BVI4 516 aaKnown RBP16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 PMS1P54277 932 aaKnown RBP16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 MED4Q9NPJ6 270 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 KLF18A0A0U1RQI7 1052 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 PPP1R12AO14974 1030 aaPredicted RBP16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 HNRNPCP07910 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 RTN1Q16799 776 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 TRIM60Q495X7 471 aa16.97■□□□□ 0.31
GTF3C4-201ENST00000372146 hCG_2014768A0A024R1R8 64 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 ZBTB43O43298 467 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 LMNAP02545 664 aaKnown RBP16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 CASP2P42575 452 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 VPS37BQ9H9H4 285 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 FBXO2Q9UK22 296 aaPredicted RBP16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 PARP2Q9UGN5 583 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 BRD3Q15059 726 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 IMPACTQ9P2X3 320 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 KIAA2013Q8IYS2 634 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 INTUQ9ULD6 942 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 HNRNPCL2B2RXH8 293 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 HNRNPCL1O60812 293 aaKnown RBP16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 NEK2P51955 445 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 FLCNQ8NFG4 579 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
GTF3C4-201ENST00000372146 EVI5O60447 810 aa16.96■□□□□ 0.3
GTF3C4-201ENST00000372146 EPB41P11171 864 aaKnown RBP16.96■□□□□ 0.3
GTF3C4-201ENST00000372146 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.3
GTF3C4-201ENST00000372146 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.3
GTF3C4-201ENST00000372146 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.3
GTF3C4-201ENST00000372146 MYL5Q02045 173 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 RCN2Q14257 317 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 ASIC2Q16515 512 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 TTC4O95801 387 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 KRT2P35908 639 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 P3H4Q92791 437 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 DYTNA2CJ06 578 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 DAPK3O43293 454 aa16.95■□□□□ 0.3
GTF3C4-201ENST00000372146 FAM133BQ5BKY9 247 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms