RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GSTO1P78417 241 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 VGLL4Q14135 290 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL5A1-202ENST00000371820 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 CHMP5Q9NZZ3 219 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 ISY1Q9ULR0 285 aaKnown RBP12.54□□□□□ -0.4
COL5A1-202ENST00000371820 CSADQ9Y600 493 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 RBBP6Q7Z6E9 1792 aaKnown RBP12.53□□□□□ -0.4
COL5A1-202ENST00000371820 CACNB3P54284 484 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 NUCB1Q02818 461 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-202ENST00000371820 SPATA5Q8NB90 893 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 GAKO14976 1311 aa12.53□□□□□ -0.4
COL5A1-202ENST00000371820 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-202ENST00000371820 CDC42EP5Q6NZY7 148 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 SKAP1Q86WV1 359 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 CD99L2Q8TCZ2 262 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 BRI3BPQ8WY22 251 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 SNX21Q969T3 373 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-202ENST00000371820 NOL10Q9BSC4 688 aaKnown RBP12.52□□□□□ -0.41
COL5A1-202ENST00000371820 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-202ENST00000371820 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.41
COL5A1-202ENST00000371820 CCL15-CCL14A0A0B4J2E2 113 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 SPDYE5A6NIY4 337 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 ENTPD3O75355 529 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 GTF2A2P52657 109 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 CAP1Q01518 475 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 SP3Q02447 781 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 CCL15Q16663 113 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-202ENST00000371820 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
COL5A1-202ENST00000371820 MCAMP43121 646 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
COL5A1-202ENST00000371820 TCP10Q12799 353 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 IDI2Q9BXS1 227 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
COL5A1-202ENST00000371820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
COL5A1-202ENST00000371820 BTDP43251 543 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 MECOMQ03112 1051 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 TAF1CQ15572 869 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-202ENST00000371820 SKOR2Q2VWA4 1001 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-202ENST00000371820 ERO1BQ86YB8 467 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 FAM43AQ8N2R8 423 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 ARMC5Q96C12 935 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
COL5A1-202ENST00000371820 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 RAB11FIP3O75154 756 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 SEC24BO95487 1268 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 BAG3O95817 575 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 PLCG2P16885 1265 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 NFIAQ12857 509 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 NAA16Q6N069 864 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 TMED8Q6PL24 325 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 TBC1D2Q9BYX2 928 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
COL5A1-202ENST00000371820 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
COL5A1-202ENST00000371820 CENPFP49454 3210 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 IRF6O14896 467 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 CETPP11597 493 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 PPIL2Q13356 520 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
COL5A1-202ENST00000371820 AACSQ86V21 672 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms