RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
RAE1-201ENST00000371242 ZBTB22O15209 634 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 ZNF500O60304 480 aaPredicted RBP12.97□□□□□ -0.33
RAE1-201ENST00000371242 POLR3DP05423 398 aaPredicted RBP12.97□□□□□ -0.33
RAE1-201ENST00000371242 FAM160A1Q05DH4 1040 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 MYH2Q9UKX2 1941 aa12.97□□□□□ -0.33
RAE1-201ENST00000371242 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 KIF28PB7ZC32 967 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 PTMAP06454 111 aaKnown RBP12.96□□□□□ -0.33
RAE1-201ENST00000371242 TM4SF1P30408 202 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 IARSP41252 1262 aaKnown RBP12.96□□□□□ -0.33
RAE1-201ENST00000371242 RCAN1P53805 252 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
RAE1-201ENST00000371242 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 PHKBQ93100 1093 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 GOLPH3LQ9H4A5 285 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 MAST2Q6P0Q8 1798 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
RAE1-201ENST00000371242 CAVIN2O95810 425 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 WTAPQ15007 396 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 STK38Q15208 465 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 RRP12Q5JTH9 1297 aaKnown RBP12.96□□□□□ -0.33
RAE1-201ENST00000371242 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 AIFM3Q96NN9 605 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 CLIC4Q9Y696 253 aa12.96□□□□□ -0.33
RAE1-201ENST00000371242 ERICH2A1L162 156 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 IFNAR1P17181 557 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 KLRK1P26718 216 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
RAE1-201ENST00000371242 RFC4P35249 363 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 KRT40Q6A162 431 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 ZNF384Q8TF68 577 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 MRPS27Q92552 414 aaKnown RBP12.95□□□□□ -0.34
RAE1-201ENST00000371242 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
RAE1-201ENST00000371242 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
RAE1-201ENST00000371242 TMED8Q6PL24 325 aaPredicted RBP12.95□□□□□ -0.34
RAE1-201ENST00000371242 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
RAE1-201ENST00000371242 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 SPTLC2O15270 562 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 AP5Z1O43299 807 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 TRIM37O94972 964 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 ANO1Q5XXA6 986 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 CCDC24Q8N4L8 307 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 ESR2Q92731 530 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 ZKSCAN3Q9BRR0 538 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 MYH6P13533 1939 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 DLEC1Q9Y238 1755 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 UBR3Q6ZT12 1888 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 RXRBP28702 533 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 DYNLL1P63167 89 aaKnown RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 TRIM29Q14134 588 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 FMR1NBQ8N0W7 255 aaPredicted RBP12.94□□□□□ -0.34
RAE1-201ENST00000371242 WASF1Q92558 559 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 LAMB1P07942 1786 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
RAE1-201ENST00000371242 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 FGRP09769 529 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■□□□ 13.9
RAE1-201ENST00000371242 ZNF165P49910 485 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 RTN1Q16799 776 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 SLC26A6Q9BXS9 759 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 NPHP1O15259 732 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 ADRA2BP18089 450 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 MECOMQ03112 1051 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 NFIXQ14938 502 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 SEC23AQ15436 765 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 TDRD7Q8NHU6 1098 aaKnown RBP12.93□□□□□ -0.34
RAE1-201ENST00000371242 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
RAE1-201ENST00000371242 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
RAE1-201ENST00000371242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAE1-201ENST00000371242 IGSF3O75054 1194 aa12.92□□□□□ -0.34
RAE1-201ENST00000371242 SLC39A14Q15043 492 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms