RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SLC35F6Q8N357 371 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 MSANTD4Q8NCY6 345 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 IP6K1Q92551 441 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 PHKBQ93100 1093 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 MAN1B1Q9UKM7 699 aa11.04□□□□□ -0.64
LRRC40-201ENST00000370952 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 USP5P45974 858 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 ANTXR2P58335 489 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 KRT40Q6A162 431 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
LRRC40-201ENST00000370952 MED15Q96RN5 788 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
LRRC40-201ENST00000370952 GRIN1Q05586 938 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
LRRC40-201ENST00000370952 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 LMBR1LQ6UX01 489 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 METTL22Q9BUU2 404 aaPredicted RBP11.03□□□□□ -0.64
LRRC40-201ENST00000370952 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 HEG1Q9ULI3 1381 aa11.03□□□□□ -0.64
LRRC40-201ENST00000370952 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.64
LRRC40-201ENST00000370952 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.64
LRRC40-201ENST00000370952 ZNF18P17022 549 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 RBL2Q08999 1139 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 E2F4Q16254 413 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 JMYQ8N9B5 988 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.64
LRRC40-201ENST00000370952 LMO7Q8WWI1 1683 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 A0A087WZG4 1122 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 PPP6R2O75170 966 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 CORO7P57737 925 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 FKBP4Q02790 459 aaKnown RBP eCLIP11.02□□□□□ -0.65
LRRC40-201ENST00000370952 MB21D2Q8IYB1 491 aaPredicted RBP11.02□□□□□ -0.65
LRRC40-201ENST00000370952 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 MAP3K14Q99558 947 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 NWD2Q9ULI1 1742 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 FOXP2O15409 715 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 STX17P56962 302 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 KLHL10Q6JEL2 608 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 FAM71BQ8TC56 605 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 RIN2Q8WYP3 895 aaPredicted RBP11.02□□□□□ -0.65
LRRC40-201ENST00000370952 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 SERTAD1Q9UHV2 236 aa11.02□□□□□ -0.65
LRRC40-201ENST00000370952 TNRQ92752 1358 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 CTAGE15A4D2H0 777 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 CTAGE9A4FU28 777 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 FGAP02671 866 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 CTAGE8P0CG41 777 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 GUCY2CP25092 1073 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 NR1I3Q14994 352 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 PLPPR3Q6T4P5 718 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 RALYLQ86SE5 291 aaKnown RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 CTAGE6Q86UF2 777 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 CTAGE4Q8IX94 777 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 POLR2DO15514 142 aaKnown RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 MYO1BO43795 1136 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 RNF40O75150 1001 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 POSTNQ15063 836 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 ZNF594Q96JF6 807 aaPredicted RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 YY1AP1Q9H869 796 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 SENP2Q9HC62 589 aa11.01□□□□□ -0.65
LRRC40-201ENST00000370952 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
LRRC40-201ENST00000370952 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
LRRC40-201ENST00000370952 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
LRRC40-201ENST00000370952 MICU3Q86XE3 530 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 GPATCH11Q8N954 259 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
LRRC40-201ENST00000370952 PPM1EQ8WY54 764 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 RABEP2Q9H5N1 569 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 COBLO75128 1261 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 CASP14P31944 242 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
LRRC40-201ENST00000370952 LRRC24Q50LG9 513 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 ATG9AQ7Z3C6 839 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 ARHGEF25Q86VW2 580 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
LRRC40-201ENST00000370952 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 NCOA7Q8NI08 942 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 MYL10Q9BUA6 226 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 C4AP0C0L4 1744 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 C4BP0C0L5 1744 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 UBR1Q8IWV7 1749 aa11□□□□□ -0.65
LRRC40-201ENST00000370952 FAM237AA0A1B0GTK4 181 aa10.99□□□□□ -0.65
LRRC40-201ENST00000370952 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
LRRC40-201ENST00000370952 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms