RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 MMP14P50281 582 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 NFIAQ12857 509 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 NBPF9Q3BBW0 867 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
BRCC3-204ENST00000369462 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 EPS15P42566 896 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 ANAPC15P60006 121 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 KCNB2Q92953 911 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
BRCC3-204ENST00000369462 ZMYM6O95789 1325 aa13.02□□□□□ -0.32
BRCC3-204ENST00000369462 FLT1P17948 1338 aa13.02□□□□□ -0.32
BRCC3-204ENST00000369462 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.33
BRCC3-204ENST00000369462 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
BRCC3-204ENST00000369462 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
BRCC3-204ENST00000369462 MYO1BO43795 1136 aa13.02□□□□□ -0.33
BRCC3-204ENST00000369462 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
BRCC3-204ENST00000369462 STK11IPQ8N1F8 1099 aa13.02□□□□□ -0.33
BRCC3-204ENST00000369462 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
BRCC3-204ENST00000369462 TCP10Q12799 353 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-204ENST00000369462 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 GLTPD2A6NH11 291 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 CYP2D6P10635 497 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-204ENST00000369462 EVX2Q03828 476 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 PPARAQ07869 468 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
BRCC3-204ENST00000369462 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-204ENST00000369462 ZNF70Q9UC06 446 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-204ENST00000369462 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
BRCC3-204ENST00000369462 POLR3DP05423 398 aaPredicted RBP13□□□□□ -0.33
BRCC3-204ENST00000369462 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 JAKMIP1Q96N16 626 aaKnown RBP13□□□□□ -0.33
BRCC3-204ENST00000369462 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
BRCC3-204ENST00000369462 NBPF3Q9H094 633 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 E7EWF7 191 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 SBK1Q52WX2 424 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 ZFPM1Q8IX07 1006 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 TRPM4Q8TD43 1214 aa13□□□□□ -0.33
BRCC3-204ENST00000369462 KRT32Q14532 448 aa12.99□□□□□ -0.33
BRCC3-204ENST00000369462 C12orf60Q5U649 245 aa12.99□□□□□ -0.33
BRCC3-204ENST00000369462 OSBPL5Q9H0X9 879 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-204ENST00000369462 INCENPQ9NQS7 918 aa12.99□□□□□ -0.33
BRCC3-204ENST00000369462 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
BRCC3-204ENST00000369462 PLCD1P51178 756 aa12.99□□□□□ -0.33
BRCC3-204ENST00000369462 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-204ENST00000369462 IL17RAQ96F46 866 aa12.99□□□□□ -0.33
BRCC3-204ENST00000369462 ASTN2O75129 1339 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-204ENST00000369462 CPA1P15085 419 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 ZSCAN29Q8IWY8 852 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-204ENST00000369462 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-204ENST00000369462 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
BRCC3-204ENST00000369462 PSMA5P28066 241 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 NEK4P51957 841 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 RABEP1Q15276 862 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 ADARB2Q9NS39 739 aaKnown RBP12.98□□□□□ -0.33
BRCC3-204ENST00000369462 CDK5RAP2Q96SN8 1893 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 HIRAP54198 1017 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-204ENST00000369462 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
BRCC3-204ENST00000369462 ENTPD3O75355 529 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 TRDNQ13061 729 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 TTC6Q86TZ1 520 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 DDTLA6NHG4 134 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 PRDM1O75626 825 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 RRP12Q5JTH9 1297 aaKnown RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 STAG1Q8WVM7 1258 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
BRCC3-204ENST00000369462 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 CYP46A1Q9Y6A2 500 aa12.97□□□□□ -0.33
BRCC3-204ENST00000369462 NEDD4P46934 1319 aa12.96□□□□□ -0.33
BRCC3-204ENST00000369462 ANP32AP39687 249 aaKnown RBP12.96□□□□□ -0.33
BRCC3-204ENST00000369462 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
BRCC3-204ENST00000369462 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
BRCC3-204ENST00000369462 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms