RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 VWA3BQ502W6 1294 aa17.6■□□□□ 0.41
PRDM1-203ENST00000369096 GABPB2Q8TAK5 448 aaPredicted RBP17.6■□□□□ 0.41
PRDM1-203ENST00000369096 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
PRDM1-203ENST00000369096 GRM8O00222 908 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 AK2P54819 239 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 LETM2Q2VYF4 491 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 ERO1AQ96HE7 468 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 A0A1B0GVL5 298 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
PRDM1-203ENST00000369096 CUL4BQ13620 913 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 ZNF804AQ7Z570 1209 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
PRDM1-203ENST00000369096 UTP11Q9Y3A2 253 aaKnown RBP17.59■□□□□ 0.41
PRDM1-203ENST00000369096 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 ARHGAP24Q8N264 748 aa17.59■□□□□ 0.41
PRDM1-203ENST00000369096 GNAT2P19087 354 aa17.58■□□□□ 0.41
PRDM1-203ENST00000369096 SF3A3Q12874 501 aaKnown RBP eCLIP17.58■□□□□ 0.41
PRDM1-203ENST00000369096 WASLO00401 505 aaPredicted RBP17.58■□□□□ 0.41
PRDM1-203ENST00000369096 ZNF174Q15697 407 aa17.58■□□□□ 0.41
PRDM1-203ENST00000369096 CHRNA2Q15822 529 aa17.58■□□□□ 0.41
PRDM1-203ENST00000369096 WDR46O15213 610 aaKnown RBP17.58■□□□□ 0.4
PRDM1-203ENST00000369096 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
PRDM1-203ENST00000369096 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
PRDM1-203ENST00000369096 MGEA5O60502 916 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 PLCG2P16885 1265 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 HS1BP3Q53T59 392 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 LIN9Q5TKA1 542 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 STK10O94804 968 aaKnown RBP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 PDE4DQ08499 809 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 NSFL1CQ9UNZ2 370 aaKnown RBP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 NIP7Q9Y221 180 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 GABPAQ06546 454 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 CTNND2Q9UQB3 1225 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 RUFY4Q6ZNE9 571 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 DHX32Q7L7V1 743 aaKnown RBP17.57■□□□□ 0.4
PRDM1-203ENST00000369096 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 WWC3Q9ULE0 1092 aa17.57■□□□□ 0.4
PRDM1-203ENST00000369096 MAN1A1P33908 653 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 BIRC2Q13490 618 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 TRPC3Q13507 836 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 PHLDB2Q86SQ0 1253 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 HELBQ8NG08 1087 aaPredicted RBP17.56■□□□□ 0.4
PRDM1-203ENST00000369096 NOX5Q96PH1 765 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 GINS2Q9Y248 185 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 KRT15P19012 456 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 SLC9C1Q4G0N8 1177 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 ANKRD20A3Q5VUR7 823 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 IFT20Q8IY31 132 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
PRDM1-203ENST00000369096 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 MAPK8IP1Q9UQF2 711 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 ALDH1L1O75891 902 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 MAGEB6Q8N7X4 407 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
PRDM1-203ENST00000369096 DACT3Q96B18 629 aaPredicted RBP17.56■□□□□ 0.4
PRDM1-203ENST00000369096 I3L4J1 428 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 PPP1R2P41236 205 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CASC4Q6P4E1 433 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 TRIM6Q9C030 488 aaPredicted RBP17.55■□□□□ 0.4
PRDM1-203ENST00000369096 ELP1O95163 1332 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CHMP2AO43633 222 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CEP104O60308 925 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 SMTNP53814 917 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 TAOK1Q7L7X3 1001 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CARD6Q9BX69 1037 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 CTTNBP2NLQ9P2B4 639 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
PRDM1-203ENST00000369096 PLCD1P51178 756 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 LGSNQ5TDP6 509 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 FCHSD1Q86WN1 690 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 KLHL7Q8IXQ5 586 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 SNX21Q969T3 373 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 NOD1Q9Y239 953 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 PCDHB15Q9Y5E8 787 aa17.55■□□□□ 0.4
PRDM1-203ENST00000369096 ABCA8O94911 1581 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 GSDMBQ8TAX9 411 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 USTQ9Y2C2 406 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 ATP6V1AP38606 617 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 ASIC2Q16515 512 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 CCDC89Q8N998 374 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 DDX27Q96GQ7 796 aaKnown RBP17.54■□□□□ 0.4
PRDM1-203ENST00000369096 A6NNZ2 444 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 TUBB8Q3ZCM7 444 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 DCUN1D2Q6PH85 259 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 CSGALNACT2Q8N6G5 542 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 WHAMMQ8TF30 809 aa17.54■□□□□ 0.4
PRDM1-203ENST00000369096 GOLGA6BA6NDN3 693 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms