RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 KRT23Q9C075 422 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 RIC1Q4ADV7 1423 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
SEMA6C-204ENST00000368914 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 PDCP20941 246 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 DLGAP5Q15398 846 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 MIGA2Q7L4E1 593 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 TBC1D22AQ8WUA7 517 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 DDX11L8A8MPP1 907 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 RNF214Q8ND24 703 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 ANGEL1Q9UNK9 670 aaKnown RBP16.64■□□□□ 0.25
SEMA6C-204ENST00000368914 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 MARCH6O60337 910 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 TTLL12Q14166 644 aaPredicted RBP16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 EPB41L4AQ9HCS5 686 aaPredicted RBP16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 PRAMEF18Q5VWM3 479 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 NEDD4P46934 1319 aa16.63■□□□□ 0.25
SEMA6C-204ENST00000368914 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 RTN1Q16799 776 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 MYO1BO43795 1136 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 ME1P48163 572 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 AIFM3Q96NN9 605 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 CNNM2Q9H8M5 875 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
SEMA6C-204ENST00000368914 TNKSO95271 1327 aa16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 SCRN1Q12765 414 aa16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
SEMA6C-204ENST00000368914 GDF11O95390 407 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 FEZ1Q99689 392 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 RASSF7Q02833 373 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 PLCG2P16885 1265 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 CAMK4Q16566 473 aa16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
SEMA6C-204ENST00000368914 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 STK38Q15208 465 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 SEMA3EO15041 775 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 CRKP46108 304 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 PLCD1P51178 756 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 ZNF287Q9HBT7 754 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 KCNJ14Q9UNX9 436 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 CTDP1Q9Y5B0 961 aaPredicted RBP16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
SEMA6C-204ENST00000368914 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 GRM1Q13255 1194 aa16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 CFAP100Q494V2 611 aa16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 CREBRFQ8IUR6 639 aa16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 SPATA32Q96LK8 384 aa16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.25
SEMA6C-204ENST00000368914 CTR9Q6PD62 1173 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 DAGLAQ9Y4D2 1042 aa16.58■□□□□ 0.24
SEMA6C-204ENST00000368914 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 NFIAQ12857 509 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 NLGN2Q8NFZ4 835 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
SEMA6C-204ENST00000368914 KRT85P78386 507 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms