RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 APOA5Q6Q788 366 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 CCDC73Q6ZRK6 1079 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
USF1-202ENST00000368020 WASF1Q92558 559 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 ARMT1Q9H993 441 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 RTEL1Q9NZ71 1219 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 MINPP1Q9UNW1 487 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
USF1-202ENST00000368020 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.2
USF1-202ENST00000368020 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 ERICH2A1L162 156 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 B4E1Z4 1266 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 ZBTB43O43298 467 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 BBOX1O75936 387 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 YEATS4O95619 227 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 KCNG4Q8TDN1 519 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 CELF1Q92879 486 aaKnown RBP16.32■□□□□ 0.2
USF1-202ENST00000368020 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
USF1-202ENST00000368020 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 KIAA1551Q9HCM1 1747 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
USF1-202ENST00000368020 TAF1P21675 1872 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 CYP7A1P22680 504 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 NEDD4P46934 1319 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 H0YIN7 160 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 KDM4AO75164 1064 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 PTMAP06454 111 aaKnown RBP16.31■□□□□ 0.2
USF1-202ENST00000368020 NT5C2P49902 561 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 STYK1Q6J9G0 422 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
USF1-202ENST00000368020 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
USF1-202ENST00000368020 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 A0A1W2PQ27 194 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 A0A1W2PQ64 194 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 A0A1W2PQD8 194 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
USF1-202ENST00000368020 PTGER2P43116 358 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 TYRO3Q06418 890 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 TRIM29Q14134 588 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 LCORLQ8N3X6 602 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
USF1-202ENST00000368020 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 SNAP23O00161 211 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
USF1-202ENST00000368020 TPM3P06753 285 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 FAM160A1Q05DH4 1040 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 ADALQ6DHV7 355 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 FBXO33Q7Z6M2 555 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 SPON1Q9HCB6 807 aa16.29■□□□□ 0.2
USF1-202ENST00000368020 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
USF1-202ENST00000368020 NR1I2O75469 434 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
USF1-202ENST00000368020 ME1P48163 572 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 TGFB2P61812 414 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
USF1-202ENST00000368020 ZSWIM5Q9P217 1185 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 ABCF2Q9UG63 623 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 COL4A1P02462 1669 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 GYG1P46976 350 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 PPARAQ07869 468 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 JMYQ8N9B5 988 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 ESR2Q92731 530 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 FAM84BQ96KN1 310 aaPredicted RBP16.28■□□□□ 0.2
USF1-202ENST00000368020 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
USF1-202ENST00000368020 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
USF1-202ENST00000368020 LAMB1P07942 1786 aa16.27■□□□□ 0.2
USF1-202ENST00000368020 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
USF1-202ENST00000368020 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.19
USF1-202ENST00000368020 ADCY5O95622 1261 aa16.27■□□□□ 0.19
USF1-202ENST00000368020 FOSBP53539 338 aa16.27■□□□□ 0.19
USF1-202ENST00000368020 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.19
USF1-202ENST00000368020 WTAPQ15007 396 aa16.27■□□□□ 0.19
USF1-202ENST00000368020 STK38Q15208 465 aa16.27■□□□□ 0.19
USF1-202ENST00000368020 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.19
USF1-202ENST00000368020 SPTY2D1Q68D10 685 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms