RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CDC37Q16543 378 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 WDR19Q8NEZ3 1342 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 MSL1Q68DK7 614 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 FKBP5Q13451 457 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 PRM3Q9NNZ6 103 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 IL1RAPL1Q9NZN1 696 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 DNAJC12Q9UKB3 198 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 PAIP2BQ9ULR5 123 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 BIRC5O15392 142 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 NBPF8Q3BBV2 869 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 C10orf88Q9H8K7 445 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 MX1P20591 662 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 SFSWAPQ12872 951 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 A1CFQ9NQ94 594 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 KIF11P52732 1056 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 WDR75Q8IWA0 830 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 NUB1Q9Y5A7 615 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 INF2Q27J81 1249 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ZC3H18Q86VM9 953 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ST20-MTHFSA0A0A6YYL1 179 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 SSFA2P28290 1259 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 COG1Q8WTW3 980 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 RPRD2Q5VT52 1461 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 FAM135BQ49AJ0 1406 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 WWC2Q6AWC2 1192 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 PFDN1O60925 122 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 KRT15P19012 456 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 KRT2P35908 639 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CAPRIN2Q6IMN6 1127 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 BHMTQ93088 406 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MAP7D3Q8IWC1 876 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 BIN2Q9UBW5 565 aaPredicted RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 RBM5P52756 815 aaKnown RBP eCLIP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MATR3P43243 847 aaKnown RBP eCLIP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 HEATR3Q7Z4Q2 680 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 TRIM58Q8NG06 486 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 GRAMD1AQ96CP6 724 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 GNAQP50148 359 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ENAHQ8N8S7 591 aaPredicted RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MMADHCQ9H3L0 296 aaPredicted RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 IKBKBO14920 756 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 NRBF2Q96F24 287 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ANKARQ7Z5J8 1434 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 TBC1D12O60347 775 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MAATS1Q7Z4T9 603 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 HOOK2Q96ED9 719 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 RIOK1Q9BRS2 568 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ZBTB40Q9NUA8 1239 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CCR3P51677 355 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CAV1Q03135 178 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MLKLQ8NB16 471 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ALDH16A1Q8IZ83 802 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CHMP7Q8WUX9 453 aaPredicted RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 TCEAL9Q9UHQ7 104 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 USP19O94966 1318 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 IGF1RP08069 1367 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC82Q8N4S0 544 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 RALYLQ86SE5 291 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 H0YCG3 227 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CALM1P0DP23 149 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CALM2P0DP24 149 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CALM3P0DP25 149 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 GUCY1B3Q02153 619 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 LZTS2Q9BRK4 669 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ERMNQ8TAM6 284 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC181Q5TID7 509 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC26Q8TAB7 109 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MTRF1LQ9UGC7 380 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ERBB4Q15303 1308 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 ERCC5P28715 1186 aaPredicted RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 KPNB1Q14974 876 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 KIFC3Q9BVG8 833 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 EPS8L2Q9H6S3 715 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 NOB1Q9ULX3 412 aaKnown RBP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 FAM212AQ96EL1 285 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 PM20D2Q8IYS1 436 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC102BQ68D86 513 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.2□□□□□ -1.74
SYNE1-207ENST00000367255 GNAI2P04899 355 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 KRT5P13647 590 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 SLC4A8Q2Y0W8 1093 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 BPIFA3Q9BQP9 254 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 STRN4Q9NRL3 753 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 SMIM23A6NLE4 172 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CSB-PGBD3P0DP91 1061 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 PRR23BQ6ZRT6 265 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 CROCCP3Q8IVE0 287 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 TBC1D22AQ8WUA7 517 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 HDAC6Q9UBN7 1215 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 MROH7-TTC4A0A0A0MT08 1334 aa4.2□□□□□ -1.74
SYNE1-207ENST00000367255 STX10O60499 249 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 CALML3P27482 149 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 SATB1Q01826 763 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 PAK2Q13177 524 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HPS3Q969F9 1004 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HYOU1Q9Y4L1 999 aa4.19□□□□□ -1.74
SYNE1-207ENST00000367255 HSF2BPO75031 334 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms