RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 GYG1P46976 350 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 SMTNP53814 917 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 EYA2O00167 538 aa22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 PPANQ9NQ55 473 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-201ENST00000361246 MFSD14BQ5SR56 506 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 CDCA7Q9BWT1 371 aaPredicted RBP22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 EPB41P11171 864 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 ARHGEF16Q5VV41 709 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 CTAGE1Q96RT6 745 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 USTQ9Y2C2 406 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 FAM169AQ9Y6X4 670 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 F13A1P00488 732 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 RXRBP28702 533 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 CCDC155Q8N6L0 562 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 WDR66Q8TBY9 1149 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 DHX32Q7L7V1 743 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 IFT81Q8WYA0 676 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 GLG1Q92896 1179 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 PLVAPQ9BX97 442 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 PPP1R7Q15435 360 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 ZNF532Q9HCE3 1301 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 SYT1P21579 422 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 PDE4DQ08499 809 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 ZSCAN30Q86W11 494 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 TXNDC16Q9P2K2 825 aa22.81■■□□□ 1.24
CDC42BPB-201ENST00000361246 ALAS1P13196 640 aa22.8■■□□□ 1.24
CDC42BPB-201ENST00000361246 MYCT1Q8N699 235 aa22.8■■□□□ 1.24
CDC42BPB-201ENST00000361246 TRPC6Q9Y210 931 aa22.8■■□□□ 1.24
CDC42BPB-201ENST00000361246 KCNQ3O43525 872 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 LRRC47Q8N1G4 583 aaKnown RBP22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 CEP112Q8N8E3 955 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 GEN1Q17RS7 908 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 SREK1Q8WXA9 508 aaKnown RBP22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.79■■□□□ 1.246e-7■■■■□ 23.6
CDC42BPB-201ENST00000361246 V9GYY5 206 aaPredicted RBP22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 TPH2Q8IWU9 490 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 RASAL2Q9UJF2 1139 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 ABT1Q9ULW3 272 aaKnown RBP22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 SNX16P57768 344 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 CKAP4Q07065 602 aaKnown RBP22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 DNAI1Q9UI46 699 aa22.79■■□□□ 1.24
CDC42BPB-201ENST00000361246 E7EVH7 732 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 NELFCDQ8IXH7 590 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 GOLGA1Q92805 767 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 STX10O60499 249 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 ERCC5P28715 1186 aaPredicted RBP22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 SULF1Q8IWU6 871 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 LRMPQ12912 555 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 VPS16Q9H269 839 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 GCNT3O95395 438 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 MLXIPQ9HAP2 919 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 KIF2AO00139 706 aaPredicted RBP22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 MED10Q9BTT4 135 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 SLC8A3P57103 927 aa22.78■■□□□ 1.24
CDC42BPB-201ENST00000361246 MAST3O60307 1309 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 MSANTD4Q8NCY6 345 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 PPM1EQ8WY54 764 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 JAKMIP2Q96AA8 810 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 KCNJ14Q9UNX9 436 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 USP19O94966 1318 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 BICDL2A1A5D9 508 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 SDR42E1Q8WUS8 393 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 LEO1Q8WVC0 666 aaPredicted RBP22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 TTC41PQ6P2S7 1318 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 USPL1Q5W0Q7 1092 aa22.77■■□□□ 1.24
CDC42BPB-201ENST00000361246 HDAC1Q13547 482 aaPredicted RBP22.77■■□□□ 1.23
CDC42BPB-201ENST00000361246 DNAJC21Q5F1R6 531 aaKnown RBP22.77■■□□□ 1.23
CDC42BPB-201ENST00000361246 KIF4AO95239 1232 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 EDC3Q96F86 508 aaKnown RBP22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 APOL6Q9BWW8 343 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 HELLSQ9NRZ9 838 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 CFAP58Q5T655 872 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 ARHGAP45Q92619 1136 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 STAMQ92783 540 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 CCDC42Q96M95 316 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 TBC1D32Q96NH3 1257 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 BCAMP50895 628 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 TFAP4Q01664 338 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 FAM102BQ5T8I3 360 aa22.76■■□□□ 1.23
CDC42BPB-201ENST00000361246 PRPF6O94906 941 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 BBXQ8WY36 941 aaPredicted RBP22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 TEKT1Q969V4 418 aa22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 ZNF496Q96IT1 587 aaPredicted RBP22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 GOLGA8HP0CJ92 632 aa22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 TTLL7Q6ZT98 887 aa22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 NOC4LQ9BVI4 516 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 IFNKQ9P0W0 207 aa22.75■■□□□ 1.23
CDC42BPB-201ENST00000361246 CRCPO75575 148 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 GAS8O95995 478 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 SLC27A2O14975 620 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 GTF2F1P35269 517 aaKnown RBP eCLIP22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 SPC25Q9HBM1 224 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 TLDC2A0PJX2 215 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 CHMLP26374 656 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 ADCY7P51828 1080 aa22.74■■□□□ 1.23
CDC42BPB-201ENST00000361246 KCNK9Q9NPC2 374 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms