RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 FAM173BQ6P4H8 233 aa23.71■■□□□ 1.39
CBWD3-201ENST00000360171 SLC16A10Q8TF71 515 aa23.71■■□□□ 1.39
CBWD3-201ENST00000360171 ARMT1Q9H993 441 aa23.71■■□□□ 1.39
CBWD3-201ENST00000360171 LCORLQ8N3X6 602 aa23.7■■□□□ 1.38
CBWD3-201ENST00000360171 LLPHQ9BRT6 129 aaKnown RBP23.7■■□□□ 1.38
CBWD3-201ENST00000360171 PRDX5P30044 214 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 RESTQ13127 1097 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 MIGA1Q8NAN2 632 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 CD209Q9NNX6 404 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 KIF3AQ9Y496 699 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 C17orf53Q8N3J3 647 aaPredicted RBP23.69■■□□□ 1.38
CBWD3-201ENST00000360171 PYCARDQ9ULZ3 195 aa23.69■■□□□ 1.38
CBWD3-201ENST00000360171 NSUN4Q96CB9 384 aaKnown RBP23.68■■□□□ 1.38
CBWD3-201ENST00000360171 CBX8Q9HC52 389 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 HMGB1P09429 215 aaKnown RBP23.68■■□□□ 1.38
CBWD3-201ENST00000360171 IL1R1P14778 569 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 MECOMQ03112 1051 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 ANO6Q4KMQ2 910 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 SMARCC2Q8TAQ2 1214 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 CTNNA3Q9UI47 895 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 CFAP45Q9UL16 551 aa23.68■■□□□ 1.38
CBWD3-201ENST00000360171 HAND2P61296 217 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 CAMK4Q16566 473 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 NAA16Q6N069 864 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-201ENST00000360171 EPB41L4AQ9HCS5 686 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-201ENST00000360171 TFIP11Q9UBB9 837 aaKnown RBP23.67■■□□□ 1.38
CBWD3-201ENST00000360171 SALL1Q9NSC2 1324 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 LUZP1Q86V48 1076 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 PLA2G4DQ86XP0 818 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 PGBD1Q96JS3 809 aa23.67■■□□□ 1.38
CBWD3-201ENST00000360171 CCDC94Q9BW85 323 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-201ENST00000360171 E7EWF7 191 aa23.66■■□□□ 1.38
CBWD3-201ENST00000360171 PRKAB2O43741 272 aa23.66■■□□□ 1.38
CBWD3-201ENST00000360171 STK3Q13188 491 aa23.66■■□□□ 1.38
CBWD3-201ENST00000360171 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-201ENST00000360171 SPC24Q8NBT2 197 aa23.66■■□□□ 1.38
CBWD3-201ENST00000360171 BRF1Q92994 677 aa23.66■■□□□ 1.38
CBWD3-201ENST00000360171 RIMBP2O15034 1052 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 GRIK5Q16478 980 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 Q6ZUG5 572 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 WDR66Q8TBY9 1149 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 BAZ2AQ9UIF9 1905 aaKnown RBP23.65■■□□□ 1.38
CBWD3-201ENST00000360171 MYH2Q9UKX2 1941 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 ZBTB7AO95365 584 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 APPP05067 770 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 IMMTQ16891 758 aaKnown RBP23.65■■□□□ 1.38
CBWD3-201ENST00000360171 CKAP2LQ8IYA6 745 aa23.65■■□□□ 1.38
CBWD3-201ENST00000360171 GSG1L2A8MUP6 293 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 PATL2C9JE40 543 aaKnown RBP23.64■■□□□ 1.38
CBWD3-201ENST00000360171 JAK2O60674 1132 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 PFKFB2O60825 505 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 ZNF710Q8N1W2 664 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 CNKSR1Q969H4 720 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 RIOK1Q9BRS2 568 aaKnown RBP23.64■■□□□ 1.38
CBWD3-201ENST00000360171 NBPF3Q9H094 633 aa23.64■■□□□ 1.38
CBWD3-201ENST00000360171 NR1I2O75469 434 aa23.64■■□□□ 1.37
CBWD3-201ENST00000360171 CDC25BP30305 580 aa23.64■■□□□ 1.37
CBWD3-201ENST00000360171 DYNLL1P63167 89 aaKnown RBP23.64■■□□□ 1.37
CBWD3-201ENST00000360171 ATL3Q6DD88 541 aa23.64■■□□□ 1.37
CBWD3-201ENST00000360171 BICD2Q8TD16 824 aa23.64■■□□□ 1.37
CBWD3-201ENST00000360171 ZNF219Q9P2Y4 722 aaPredicted RBP23.64■■□□□ 1.37
CBWD3-201ENST00000360171 MAGEB6P1A0A0J9YX57 407 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 ZNF75DP51815 510 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 ALX1Q15699 326 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 IFNL3Q8IZI9 196 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 SLC4A4Q9Y6R1 1079 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 SNED1Q8TER0 1413 aa23.63■■□□□ 1.37
CBWD3-201ENST00000360171 H3BQV1 296 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 CTAGE5O15320 804 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 PTGS1P23219 599 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 IFFO2Q5TF58 517 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 UPF1Q92900 1129 aaKnown RBP eCLIP23.62■■□□□ 1.37
CBWD3-201ENST00000360171 AGXT2Q9BYV1 514 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 ZMYM6O95789 1325 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 TIAM2Q8IVF5 1701 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 ZNF165P49910 485 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 SMAP1Q8IYB5 467 aaPredicted RBP23.62■■□□□ 1.37
CBWD3-201ENST00000360171 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
CBWD3-201ENST00000360171 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
CBWD3-201ENST00000360171 ZNF213O14771 459 aa23.61■■□□□ 1.37
CBWD3-201ENST00000360171 GNAT2P19087 354 aa23.61■■□□□ 1.37
CBWD3-201ENST00000360171 SPTY2D1Q68D10 685 aaPredicted RBP23.61■■□□□ 1.37
CBWD3-201ENST00000360171 LDHBP07195 334 aaKnown RBP23.61■■□□□ 1.37
CBWD3-201ENST00000360171 SCRN1Q12765 414 aa23.61■■□□□ 1.37
CBWD3-201ENST00000360171 DHX32Q7L7V1 743 aaKnown RBP23.61■■□□□ 1.37
CBWD3-201ENST00000360171 DZIP1Q86YF9 867 aaKnown RBP23.61■■□□□ 1.37
CBWD3-201ENST00000360171 CHMP4CQ96CF2 233 aa23.61■■□□□ 1.37
CBWD3-201ENST00000360171 ZNF646O15015 1829 aaPredicted RBP23.6■■□□□ 1.37
CBWD3-201ENST00000360171 SARM1Q6SZW1 724 aa23.6■■□□□ 1.37
CBWD3-201ENST00000360171 TBC1D10CQ8IV04 446 aa23.6■■□□□ 1.37
CBWD3-201ENST00000360171 TRIM5Q9C035 493 aa23.6■■□□□ 1.37
CBWD3-201ENST00000360171 ZC3H12CQ9C0D7 883 aaKnown RBP23.6■■□□□ 1.37
CBWD3-201ENST00000360171 COA1Q9GZY4 146 aa23.6■■□□□ 1.37
CBWD3-201ENST00000360171 RCOR1Q9UKL0 485 aa23.6■■□□□ 1.37
CBWD3-201ENST00000360171 CTIFO43310 598 aaKnown RBP23.59■■□□□ 1.37
CBWD3-201ENST00000360171 CCDC186Q7Z3E2 898 aa23.59■■□□□ 1.37
CBWD3-201ENST00000360171 SDR42E1Q8WUS8 393 aa23.59■■□□□ 1.37
CBWD3-201ENST00000360171 NAPBQ9H115 298 aa23.59■■□□□ 1.37
CBWD3-201ENST00000360171 ATF5Q9Y2D1 282 aaPredicted RBP23.59■■□□□ 1.37
CBWD3-201ENST00000360171 CDK5RAP2Q96SN8 1893 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms