RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RPL13P26373 211 aaKnown RBP17.9■□□□□ 0.46
COL18A1-203ENST00000359759 TRIM68Q6AZZ1 485 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 TBC1D31Q96DN5 1066 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 DIXDC1Q155Q3 683 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 SECISBP2LQ93073 1101 aaKnown RBP17.9■□□□□ 0.46
COL18A1-203ENST00000359759 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-203ENST00000359759 PIK3AP1Q6ZUJ8 805 aa17.9■□□□□ 0.46
COL18A1-203ENST00000359759 RRAGDQ9NQL2 400 aaPredicted RBP17.9■□□□□ 0.46
COL18A1-203ENST00000359759 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL18A1-203ENST00000359759 CEP104O60308 925 aa17.89■□□□□ 0.46
COL18A1-203ENST00000359759 SEC24BO95487 1268 aa17.89■□□□□ 0.46
COL18A1-203ENST00000359759 UBL4BQ8N7F7 174 aa17.89■□□□□ 0.46
COL18A1-203ENST00000359759 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.46
COL18A1-203ENST00000359759 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.46
COL18A1-203ENST00000359759 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
COL18A1-203ENST00000359759 MAN1A1P33908 653 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 CASC4Q6P4E1 433 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 FANCCQ00597 558 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-203ENST00000359759 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 ANKRD42Q8N9B4 389 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 GNA11P29992 359 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 TAOK1Q7L7X3 1001 aa17.89■□□□□ 0.45
COL18A1-203ENST00000359759 POLR2DO15514 142 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 DHX32Q7L7V1 743 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 NOX5Q96PH1 765 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 BAIAP2L1Q9UHR4 511 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 CWF19L2Q2TBE0 894 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 RABGAP1Q9Y3P9 1069 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 TRAF1Q13077 416 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 RNF10Q8N5U6 811 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 RILPQ96NA2 401 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 CABS1Q96KC9 395 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 MYO1AQ9UBC5 1043 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 CETN3O15182 167 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 TBC1D8O95759 1140 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 TTF2Q9UNY4 1162 aaKnown RBP17.88■□□□□ 0.45
COL18A1-203ENST00000359759 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
COL18A1-203ENST00000359759 CCDC117Q8IWD4 279 aaPredicted RBP17.87■□□□□ 0.45
COL18A1-203ENST00000359759 SMC5Q8IY18 1101 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 OGFOD1Q8N543 542 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 I3L4J1 428 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 CALUO43852 315 aaPredicted RBP17.87■□□□□ 0.45
COL18A1-203ENST00000359759 GNAT2P19087 354 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 RBM28Q9NW13 759 aaKnown RBP17.87■□□□□ 0.45
COL18A1-203ENST00000359759 TAB2Q9NYJ8 693 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 LIN9Q5TKA1 542 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 WHAMMQ8TF30 809 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 CBX8Q9HC52 389 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 B4E1Z4 1266 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 KRT15P19012 456 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 CUL4BQ13620 913 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 CSGALNACT2Q8N6G5 542 aa17.87■□□□□ 0.45
COL18A1-203ENST00000359759 MAP7Q14244 749 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-203ENST00000359759 TUBBP07437 444 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 FCHSD1Q86WN1 690 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 DACT3Q96B18 629 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-203ENST00000359759 IL16Q14005 1332 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 ABCC5O15440 1437 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 GIPC1O14908 333 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
COL18A1-203ENST00000359759 GUCY2FP51841 1108 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 RAD51AP2Q09MP3 1159 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 VCXQ9H320 206 aa17.86■□□□□ 0.45
COL18A1-203ENST00000359759 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
COL18A1-203ENST00000359759 TXKP42681 527 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 CNNM4Q6P4Q7 775 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 SND1Q7KZF4 910 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■■■■□ 19.4
COL18A1-203ENST00000359759 CTTNBP2NLQ9P2B4 639 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 ZNF75DP51815 510 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 VWA3BQ502W6 1294 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 CCDC38Q502W7 563 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 MTX1Q13505 466 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 TRPC3Q13507 836 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 NPHP3Q7Z494 1330 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 TRIM14Q14142 442 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 AFAP1L2Q8N4X5 818 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 ACEP12821 1306 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 CHMLP26374 656 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 PAK1Q13153 545 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 NCAPH2Q6IBW4 605 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 DYMQ7RTS9 669 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 CCDC105Q8IYK2 499 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.85■□□□□ 0.456e-9■□□□□ 9.6
COL18A1-203ENST00000359759 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
COL18A1-203ENST00000359759 VPS37BQ9H9H4 285 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 KCNH3Q9ULD8 1083 aa17.85■□□□□ 0.45
COL18A1-203ENST00000359759 STK10O94804 968 aaKnown RBP17.84■□□□□ 0.45
COL18A1-203ENST00000359759 MUM1Q2TAK8 710 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
COL18A1-203ENST00000359759 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.84■□□□□ 0.45
COL18A1-203ENST00000359759 USP26Q9BXU7 913 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms