RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 SDSP20132 328 aa29.24■■■□□ 2.27
ALKAL1-201ENST00000358543 OSBPL5Q9H0X9 879 aaPredicted RBP29.24■■■□□ 2.27
ALKAL1-201ENST00000358543 ARMT1Q9H993 441 aa29.24■■■□□ 2.27
ALKAL1-201ENST00000358543 GBA2Q9HCG7 927 aaPredicted RBP29.24■■■□□ 2.27
ALKAL1-201ENST00000358543 COL2A1P02458 1487 aaPredicted RBP29.23■■■□□ 2.27
ALKAL1-201ENST00000358543 FLT1P17948 1338 aa29.23■■■□□ 2.27
ALKAL1-201ENST00000358543 CDAN1Q8IWY9 1227 aa29.23■■■□□ 2.27
ALKAL1-201ENST00000358543 C2orf69Q8N8R5 385 aa29.23■■■□□ 2.27
ALKAL1-201ENST00000358543 ATRNL1Q5VV63 1379 aa29.23■■■□□ 2.27
ALKAL1-201ENST00000358543 USP5P45974 858 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 SH3BP5LQ7L8J4 393 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 SKAP1Q86WV1 359 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 MAPKAPK5Q8IW41 473 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 STRBPQ96SI9 672 aaKnown RBP29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 DHX36Q9H2U1 1008 aaKnown RBP29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 HELLSQ9NRZ9 838 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 CDK5RAP2Q96SN8 1893 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 FOCADQ5VW36 1801 aa29.22■■■□□ 2.27
ALKAL1-201ENST00000358543 HIP1O00291 1037 aa29.21■■■□□ 2.27
ALKAL1-201ENST00000358543 MKRN1Q9UHC7 482 aaKnown RBP29.21■■■□□ 2.27
ALKAL1-201ENST00000358543 SSC5DA1L4H1 1573 aa29.21■■■□□ 2.27
ALKAL1-201ENST00000358543 DDTLA6NHG4 134 aaPredicted RBP29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 PPP1R12BO60237 982 aaPredicted RBP29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 MAP3K11Q16584 847 aa29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 ATP8A2Q9NTI2 1148 aa29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 TLL2Q9Y6L7 1015 aa29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 AK9Q5TCS8 1911 aa29.2■■■□□ 2.26
ALKAL1-201ENST00000358543 M0R2C6 588 aa29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 GPAA1O43292 621 aa29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 ARMC9Q7Z3E5 817 aa29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 SAPCD2Q86UD0 394 aa29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 ZSCAN29Q8IWY8 852 aaPredicted RBP29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 CSRNP1Q96S65 589 aa29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 SEC62Q99442 399 aaKnown RBP29.19■■■□□ 2.26
ALKAL1-201ENST00000358543 GNAT2P19087 354 aa29.18■■■□□ 2.26
ALKAL1-201ENST00000358543 BMP2KLQ5H9B9 411 aa29.18■■■□□ 2.26
ALKAL1-201ENST00000358543 SLC4A4Q9Y6R1 1079 aa29.18■■■□□ 2.26
ALKAL1-201ENST00000358543 PAPPA2Q9BXP8 1791 aa29.18■■■□□ 2.26
ALKAL1-201ENST00000358543 PRKAB2O43741 272 aa29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 USP2O75604 605 aaPredicted RBP29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 MAP3K10Q02779 954 aa29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 MCMDC2Q4G0Z9 681 aa29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 DCAF15Q66K64 600 aa29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 SDR42E1Q8WUS8 393 aa29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 DCP1AQ9NPI6 582 aaPredicted RBP29.17■■■□□ 2.26
ALKAL1-201ENST00000358543 UNCXA6NJT0 531 aa29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 TBC1D12O60347 775 aa29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 NMIQ13287 307 aaPredicted RBP29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 TTLL12Q14166 644 aaPredicted RBP29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 HHIPL1Q96JK4 782 aa29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 FAM227BQ96M60 508 aa29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 PI4KBQ9UBF8 816 aa29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 ABT1Q9ULW3 272 aaKnown RBP29.16■■■□□ 2.26
ALKAL1-201ENST00000358543 A0A0D9SFI3 127 aa29.15■■■□□ 2.26
ALKAL1-201ENST00000358543 GIMAP6Q6P9H5 292 aa29.15■■■□□ 2.26
ALKAL1-201ENST00000358543 DIAPH3Q9NSV4 1193 aa29.15■■■□□ 2.26
ALKAL1-201ENST00000358543 PALD1Q9ULE6 856 aa29.15■■■□□ 2.26
ALKAL1-201ENST00000358543 ANGEL1Q9UNK9 670 aaKnown RBP29.15■■■□□ 2.26
ALKAL1-201ENST00000358543 IREB2P48200 963 aaKnown RBP29.14■■■□□ 2.26
ALKAL1-201ENST00000358543 HUNKP57058 714 aa29.14■■■□□ 2.26
ALKAL1-201ENST00000358543 PRKG1Q13976 671 aa29.14■■■□□ 2.26
ALKAL1-201ENST00000358543 FOXP4Q8IVH2 680 aaPredicted RBP29.14■■■□□ 2.26
ALKAL1-201ENST00000358543 DDRGK1Q96HY6 314 aa29.14■■■□□ 2.26
ALKAL1-201ENST00000358543 RASSF10A6NK89 507 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 GSG1L2A8MUP6 293 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 PATL2C9JE40 543 aaKnown RBP29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 LDLRAD1Q5T700 205 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 MOB2Q70IA6 237 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 MIGA2Q7L4E1 593 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 TTC6Q86TZ1 520 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 METTL16Q86W50 562 aaKnown RBP29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 ZNF341Q9BYN7 854 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 MCM9Q9NXL9 1143 aa29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 SAP30BPQ9UHR5 308 aaKnown RBP29.13■■■□□ 2.25
ALKAL1-201ENST00000358543 UBE2Q2LH0YL09 131 aa29.12■■■□□ 2.25
ALKAL1-201ENST00000358543 HLA-DOAP06340 250 aa29.12■■■□□ 2.25
ALKAL1-201ENST00000358543 KLRG1Q96E93 195 aa29.12■■■□□ 2.25
ALKAL1-201ENST00000358543 FZD1Q9UP38 647 aa29.12■■■□□ 2.25
ALKAL1-201ENST00000358543 MYH1P12882 1939 aa29.12■■■□□ 2.25
ALKAL1-201ENST00000358543 CWC27Q6UX04 472 aaKnown RBP29.11■■■□□ 2.25
ALKAL1-201ENST00000358543 HERC5Q9UII4 1024 aaKnown RBP29.11■■■□□ 2.25
ALKAL1-201ENST00000358543 ZNF112Q9UJU3 913 aa29.11■■■□□ 2.25
ALKAL1-201ENST00000358543 POLR3DP05423 398 aaPredicted RBP29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 CHMLP26374 656 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 MFAP1P55081 439 aaKnown RBP29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 MAP3K9P80192 1104 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 HTRA3P83110 453 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 DEFB115Q30KQ5 88 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 CCDC129Q6ZRS4 1044 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 EHD4Q9H223 541 aa29.1■■■□□ 2.25
ALKAL1-201ENST00000358543 ANKRD13AQ8IZ07 590 aa29.09■■■□□ 2.25
ALKAL1-201ENST00000358543 NACAP1Q9BZK3 213 aa29.09■■■□□ 2.25
ALKAL1-201ENST00000358543 TAOK2Q9UL54 1235 aa29.09■■■□□ 2.25
ALKAL1-201ENST00000358543 DDX60LQ5H9U9 1706 aaKnown RBP29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 NAV1Q8NEY1 1877 aa29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 RGMBQ6NW40 437 aa29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 ZNF589Q86UQ0 364 aaPredicted RBP29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 IFNL3Q8IZI9 196 aa29.08■■■□□ 2.25
ALKAL1-201ENST00000358543 RUFY2Q8WXA3 655 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms