RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TRPM7Q96QT4 1865 aa18.25■□□□□ 0.51
TPM1-206ENST00000358278 DDX4Q9NQI0 724 aaKnown RBP18.25■□□□□ 0.51
TPM1-206ENST00000358278 ATP8A2Q9NTI2 1148 aa18.25■□□□□ 0.51
TPM1-206ENST00000358278 FAM198AQ9UFP1 575 aa18.25■□□□□ 0.51
TPM1-206ENST00000358278 KRT26Q7Z3Y9 468 aa18.24■□□□□ 0.51
TPM1-206ENST00000358278 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
TPM1-206ENST00000358278 NACAP1Q9BZK3 213 aa18.24■□□□□ 0.51
TPM1-206ENST00000358278 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
TPM1-206ENST00000358278 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
TPM1-206ENST00000358278 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 KIF3CO14782 793 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 ENTPD3O75355 529 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 DEFB129Q9H1M3 183 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 RPAP1Q9BWH6 1393 aaPredicted RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 TDO2P48775 406 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 RASA3Q14644 834 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 OSBPL5Q9H0X9 879 aaPredicted RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
TPM1-206ENST00000358278 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
TPM1-206ENST00000358278 AMOTL1Q8IY63 956 aa18.22■□□□□ 0.51
TPM1-206ENST00000358278 FAM151AQ8WW52 585 aa18.22■□□□□ 0.51
TPM1-206ENST00000358278 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
TPM1-206ENST00000358278 NAPBQ9H115 298 aa18.22■□□□□ 0.51
TPM1-206ENST00000358278 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
TPM1-206ENST00000358278 COL2A1P02458 1487 aaPredicted RBP18.22■□□□□ 0.51
TPM1-206ENST00000358278 ADM5C9JUS6 153 aa18.21■□□□□ 0.51
TPM1-206ENST00000358278 SLC4A8Q2Y0W8 1093 aa18.21■□□□□ 0.51
TPM1-206ENST00000358278 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
TPM1-206ENST00000358278 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
TPM1-206ENST00000358278 EPB41L4AQ9HCS5 686 aaPredicted RBP18.21■□□□□ 0.51
TPM1-206ENST00000358278 PPP2R3BQ9Y5P8 575 aa18.21■□□□□ 0.51
TPM1-206ENST00000358278 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 USP48Q86UV5 1035 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 ZFPM1Q8IX07 1006 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 GLIS2Q9BZE0 524 aaPredicted RBP18.2■□□□□ 0.5
TPM1-206ENST00000358278 MKRN1Q9UHC7 482 aaKnown RBP18.2■□□□□ 0.5
TPM1-206ENST00000358278 FOXP2O15409 715 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 REC8O95072 547 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
TPM1-206ENST00000358278 C8orf34Q49A92 452 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 CSRNP1Q96S65 589 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
TPM1-206ENST00000358278 ARPP21Q9UBL0 812 aaPredicted RBP18.2■□□□□ 0.5
TPM1-206ENST00000358278 PALD1Q9ULE6 856 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 ATRNL1Q5VV63 1379 aa18.2■□□□□ 0.5
TPM1-206ENST00000358278 HLA-DOAP06340 250 aa18.19■□□□□ 0.5
TPM1-206ENST00000358278 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 USP17L21D6R901 530 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 EIF5BO60841 1220 aaKnown RBP18.18■□□□□ 0.5
TPM1-206ENST00000358278 PTH1RQ03431 593 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 DDTLA6NHG4 134 aaPredicted RBP18.18■□□□□ 0.5
TPM1-206ENST00000358278 TOMM70O94826 608 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 FGAP02671 866 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 ALX1Q15699 326 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
TPM1-206ENST00000358278 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
TPM1-206ENST00000358278 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 TEPSINQ96N21 525 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
TPM1-206ENST00000358278 OTOFQ9HC10 1997 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 NBPF12Q5TAG4 269 aaPredicted RBP18.16■□□□□ 0.5
TPM1-206ENST00000358278 DLK2Q6UY11 383 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 RBM46Q8TBY0 533 aaKnown RBP18.16■□□□□ 0.5
TPM1-206ENST00000358278 HOOK2Q96ED9 719 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 PI4KBQ9UBF8 816 aa18.16■□□□□ 0.5
TPM1-206ENST00000358278 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
TPM1-206ENST00000358278 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 TRAF5O00463 557 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 CYP2D6P10635 497 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 NF2P35240 595 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 SUPT20HL1Q3ZLR7 823 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 SBK1Q52WX2 424 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 CRACR2BQ8N4Y2 399 aaPredicted RBP18.15■□□□□ 0.5
TPM1-206ENST00000358278 MAP4K1Q92918 833 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
TPM1-206ENST00000358278 PLCD1P51178 756 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 C12orf60Q5U649 245 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
TPM1-206ENST00000358278 SSC5DA1L4H1 1573 aa18.14■□□□□ 0.49
TPM1-206ENST00000358278 HAND2P61296 217 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms