RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 SELENOSQ9BQE4 189 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 KDM6BO15054 1643 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 ADKP55263 362 aaKnown RBP17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 PFKFB2O60825 505 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 CCDC174Q6PII3 467 aa17.54■□□□□ 0.4
TRAPPC11-202ENST00000357207 ADCK5Q3MIX3 580 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 TAB2Q9NYJ8 693 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 KDM5AP29375 1690 aaKnown RBP17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 TNNI2P48788 182 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 PDE4DQ08499 809 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 PNOCQ13519 176 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 GBP6Q6ZN66 633 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
TRAPPC11-202ENST00000357207 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 TRAF5O00463 557 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 INPP5BP32019 993 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 C6orf163Q5TEZ5 329 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 PPM1EQ8WY54 764 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 MAP4K1Q92918 833 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 NIP7Q9Y221 180 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 GOLGA6BA6NDN3 693 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 RRP36Q96EU6 259 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 PAIP2Q9BPZ3 127 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 MKRN1Q9UHC7 482 aaKnown RBP17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
TRAPPC11-202ENST00000357207 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 TTC38Q5R3I4 469 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 PPP4R3AQ6IN85 833 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 TTC14Q96N46 770 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 SAMM50Q9Y512 469 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 CMA1P23946 247 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 CCDC6Q16204 474 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 IL17REQ8NFR9 667 aa17.52■□□□□ 0.39
TRAPPC11-202ENST00000357207 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 SV2BQ7L1I2 683 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 MTRF1LQ9UGC7 380 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 LONRF3Q496Y0 759 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 PIK3AP1Q6ZUJ8 805 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 IKBKGQ9Y6K9 419 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 SMIM23A6NLE4 172 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 MAGEA1P43355 309 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 DMTNQ08495 405 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 LETM2Q2VYF4 491 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 PPP2R2CQ9Y2T4 447 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
TRAPPC11-202ENST00000357207 HPDP32754 393 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 RAPGEF1Q13905 1077 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 HS2ST1Q7LGA3 356 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 ARMT1Q9H993 441 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 SERTAD1Q9UHV2 236 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 ACTN2P35609 894 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 DESI2Q9BSY9 194 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 SAMD15Q9P1V8 674 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 UBLCP1Q8WVY7 318 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 STAMQ92783 540 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 CCDC51Q96ER9 411 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 SEC62Q99442 399 aaKnown RBP17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 PPFIA1Q13136 1202 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 CCDC26Q8TAB7 109 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
TRAPPC11-202ENST00000357207 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 SND1Q7KZF4 910 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 IFT20Q8IY31 132 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 FANCLQ9NW38 375 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 KCNA6P17658 529 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 RABEP2Q9H5N1 569 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 ADAMTS2O95450 1211 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 ITGA6P23229 1130 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 CABLES1Q8TDN4 633 aa17.49■□□□□ 0.39
TRAPPC11-202ENST00000357207 ZAP70P43403 619 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 CNNM4Q6P4Q7 775 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 RPGRIP1Q96KN7 1286 aa17.48■□□□□ 0.39
TRAPPC11-202ENST00000357207 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms