RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 GINS2Q9Y248 185 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 CHMP2AO43633 222 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 PAK2Q13177 524 aa12.82□□□□□ -0.36
SPTBN1-202ENST00000356805 PDE1AP54750 535 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 VWA3BQ502W6 1294 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 SPOUT1Q5T280 376 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 C8orf74Q6P047 294 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 ZNF75DP51815 510 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 CYP26C1Q6V0L0 522 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 RPAINQ86UA6 219 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 RBSNQ9H1K0 784 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 IGSF3O75054 1194 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 APBA1Q02410 837 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 EFCAB8A8MWE9 144 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 PPP2R5EQ16537 467 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC122Q5T0U0 273 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
SPTBN1-202ENST00000356805 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 TXNDC9O14530 226 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 TRPC3Q13507 836 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 ANKRD36BQ8N2N9 1353 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 RXRAP19793 462 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 PRR16Q569H4 304 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 MAEAQ7L5Y9 396 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 GBP5Q96PP8 586 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 NUP58Q9BVL2 599 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 CALML3P27482 149 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 HIP1RO75146 1068 aa12.8□□□□□ -0.36
SPTBN1-202ENST00000356805 ANXA1P04083 346 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■■□ 20.8
SPTBN1-202ENST00000356805 TACO1Q9BSH4 297 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 ASXL1Q8IXJ9 1541 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 FAN1Q9Y2M0 1017 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 MCUR1Q96AQ8 359 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC51Q96ER9 411 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 CETN3O15182 167 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 ARMC9Q7Z3E5 817 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 MICAL1Q8TDZ2 1067 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 HSP90AA5PQ58FG0 334 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 ANKRD13DQ6ZTN6 518 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
SPTBN1-202ENST00000356805 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 SCAF11Q99590 1463 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 WDR46O15213 610 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 SMTNP53814 917 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 GABPB2Q8TAK5 448 aaPredicted RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 TTC21BQ7Z4L5 1316 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 MAN1A1P33908 653 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 STRN3Q13033 797 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 SRGAP1Q7Z6B7 1085 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 PCDHB15Q9Y5E8 787 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 VWA3AA6NCI4 1184 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 FAM83GA6ND36 823 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 USTQ9Y2C2 406 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 FAM170AA1A519 330 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 NOP56O00567 594 aaKnown RBP12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 VCX3AQ9NNX9 186 aa12.78□□□□□ -0.36
SPTBN1-202ENST00000356805 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms