RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 V9GYY5 206 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-202ENST00000355480 KRT9P35527 623 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 TRPC3Q13507 836 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 CNNM4Q6P4Q7 775 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 RNF34Q969K3 372 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 ARHGEF35A5YM69 484 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 NCAPH2Q6IBW4 605 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 ORAI2Q96SN7 254 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 GLT8D2Q9H1C3 349 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
COL18A1-202ENST00000355480 ANGEL1Q9UNK9 670 aaKnown RBP20.21■□□□□ 0.83
COL18A1-202ENST00000355480 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
COL18A1-202ENST00000355480 SLC1A4P43007 532 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 CFAP58Q5T655 872 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 AGTPBP1Q9UPW5 1226 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 FAM160A1Q05DH4 1040 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 CCDC122Q5T0U0 273 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL18A1-202ENST00000355480 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
COL18A1-202ENST00000355480 TNFAIP3P21580 790 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 CERS3Q8IU89 383 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 LPIN2Q92539 896 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 GAS8O95995 478 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 VAV2P52735 878 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 INF2Q27J81 1249 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 MAP7D1Q3KQU3 841 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 ANKS4BQ8N8V4 417 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
COL18A1-202ENST00000355480 KIFC2Q96AC6 838 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 ODF2LQ9ULJ1 636 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 AKR1B15C9JRZ8 316 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-202ENST00000355480 DKC1O60832 514 aaKnown RBP eCLIP20.19■□□□□ 0.823e-7■■■■■ 31.1
COL18A1-202ENST00000355480 TCP10Q12799 353 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 SPATA24Q86W54 205 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-202ENST00000355480 SPOPO43791 374 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 CALUO43852 315 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-202ENST00000355480 RHOXF2BP0C7M4 288 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 RASA3Q14644 834 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 PROCA1Q8NCQ7 364 aaPredicted RBP20.19■□□□□ 0.82
COL18A1-202ENST00000355480 RHOXF2Q9BQY4 288 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
COL18A1-202ENST00000355480 ZBED4O75132 1171 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 SUPT20HQ8NEM7 779 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 JAKMIP2Q96AA8 810 aa20.19■□□□□ 0.82
COL18A1-202ENST00000355480 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 MAEAQ7L5Y9 396 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-202ENST00000355480 KCNK9Q9NPC2 374 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
COL18A1-202ENST00000355480 HOXB7P09629 217 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 SYT10Q6XYQ8 523 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 ADCY7P51828 1080 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 VWA3BQ502W6 1294 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 CTDSPL2Q05D32 466 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 TESK2Q96S53 571 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 VPS16Q9H269 839 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 RSPH14Q9UHP6 348 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
COL18A1-202ENST00000355480 USH1GQ495M9 461 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 BAG1Q99933 345 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-202ENST00000355480 PTPRKQ15262 1439 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 NSMFQ6X4W1 530 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 DIS3L2Q8IYB7 885 aaKnown RBP20.17■□□□□ 0.82
COL18A1-202ENST00000355480 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 SPATA5Q8NB90 893 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 AZI2Q9H6S1 392 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 ZKSCAN5Q9Y2L8 839 aa20.17■□□□□ 0.82
COL18A1-202ENST00000355480 PDE6BP35913 854 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 MAPKAPK5Q8IW41 473 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-202ENST00000355480 FAM227BQ96M60 508 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 XRCC6P12956 609 aaKnown RBP eCLIP20.16■□□□□ 0.822e-6■■■■□ 25.4
COL18A1-202ENST00000355480 SUCLG2Q96I99 432 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 E7EVH7 732 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 NONOQ15233 471 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL18A1-202ENST00000355480 FAM204AQ9H8W3 233 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 CETN3O15182 167 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 TUBB4BP68371 445 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 CFAP157Q5JU67 520 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 ZBTB9Q96C00 473 aa20.16■□□□□ 0.82
COL18A1-202ENST00000355480 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
COL18A1-202ENST00000355480 IL13P35225 146 aa20.15■□□□□ 0.82
COL18A1-202ENST00000355480 IGSF22Q8N9C0 903 aa20.15■□□□□ 0.82
COL18A1-202ENST00000355480 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-202ENST00000355480 NIM1KQ8IY84 436 aa20.15■□□□□ 0.82
COL18A1-202ENST00000355480 CSGALNACT2Q8N6G5 542 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms