RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PI16Q6UXB8 463 aa19.68■□□□□ 0.74
PDGFA-201ENST00000354513 FAM163AQ96GL9 167 aaPredicted RBP19.68■□□□□ 0.74
PDGFA-201ENST00000354513 CPA4Q9UI42 421 aa19.68■□□□□ 0.74
PDGFA-201ENST00000354513 HDAC5Q9UQL6 1122 aa19.68■□□□□ 0.74
PDGFA-201ENST00000354513 MROH7-TTC4A0A0A0MT08 1334 aa19.68■□□□□ 0.74
PDGFA-201ENST00000354513 PDHXO00330 501 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 RHBDL3P58872 404 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 ZGPATQ8N5A5 531 aaKnown RBP19.67■□□□□ 0.74
PDGFA-201ENST00000354513 SH3TC2Q8TF17 1288 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 HMG20BQ9P0W2 317 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
PDGFA-201ENST00000354513 ABCF2Q9UG63 623 aa19.67■□□□□ 0.74
PDGFA-201ENST00000354513 BTDP43251 543 aa19.66■□□□□ 0.74
PDGFA-201ENST00000354513 MECOMQ03112 1051 aa19.66■□□□□ 0.74
PDGFA-201ENST00000354513 DZIP1Q86YF9 867 aaKnown RBP19.66■□□□□ 0.74
PDGFA-201ENST00000354513 TRIM47Q96LD4 638 aa19.66■□□□□ 0.74
PDGFA-201ENST00000354513 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
PDGFA-201ENST00000354513 ECM2O94769 699 aaPredicted RBP19.65■□□□□ 0.74
PDGFA-201ENST00000354513 MVPQ14764 893 aaKnown RBP19.65■□□□□ 0.74
PDGFA-201ENST00000354513 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
PDGFA-201ENST00000354513 SCYL3Q8IZE3 742 aa19.65■□□□□ 0.74
PDGFA-201ENST00000354513 DOCK3Q8IZD9 2030 aa19.65■□□□□ 0.74
PDGFA-201ENST00000354513 GPR75-ASB3A0A0A6YYF3 556 aa19.64■□□□□ 0.73
PDGFA-201ENST00000354513 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
PDGFA-201ENST00000354513 BCRP11274 1271 aa19.64■□□□□ 0.73
PDGFA-201ENST00000354513 ARID4AP29374 1257 aaPredicted RBP19.64■□□□□ 0.73
PDGFA-201ENST00000354513 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
PDGFA-201ENST00000354513 AKAP2Q9Y2D5 859 aa19.64■□□□□ 0.73
PDGFA-201ENST00000354513 PLXNB2O15031 1838 aa19.64■□□□□ 0.73
PDGFA-201ENST00000354513 CXCL11O14625 94 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 PTPRAP18433 802 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 PICALMQ13492 652 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
PDGFA-201ENST00000354513 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 NSUN4Q96CB9 384 aaKnown RBP19.63■□□□□ 0.73
PDGFA-201ENST00000354513 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
PDGFA-201ENST00000354513 MYCP01106 439 aaPredicted RBP19.62■□□□□ 0.73
PDGFA-201ENST00000354513 GNAI2P04899 355 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 CYP2C8P10632 490 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 OSBPP22059 807 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 MCAMP43121 646 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 TMEM57Q8N5G2 664 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 SPATA5Q8NB90 893 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 SHISA4Q96DD7 197 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 NEUROD6Q96NK8 337 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 SRRDQ9UH36 339 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 MYH1P12882 1939 aa19.62■□□□□ 0.73
PDGFA-201ENST00000354513 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
PDGFA-201ENST00000354513 GNRH1P01148 92 aa19.61■□□□□ 0.73
PDGFA-201ENST00000354513 PSMC4P43686 418 aa19.61■□□□□ 0.73
PDGFA-201ENST00000354513 KIF22Q14807 665 aa19.61■□□□□ 0.73
PDGFA-201ENST00000354513 SPTY2D1Q68D10 685 aaPredicted RBP19.61■□□□□ 0.73
PDGFA-201ENST00000354513 FRAT1Q92837 279 aaPredicted RBP19.61■□□□□ 0.73
PDGFA-201ENST00000354513 ZHX2Q9Y6X8 837 aa19.61■□□□□ 0.73
PDGFA-201ENST00000354513 ALPK3Q96L96 1907 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 DDX60LQ5H9U9 1706 aaKnown RBP19.6■□□□□ 0.73
PDGFA-201ENST00000354513 PRMT2P55345 433 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 POLA2Q14181 598 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 MTFR1Q15390 333 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 ZSCAN29Q8IWY8 852 aaPredicted RBP19.6■□□□□ 0.73
PDGFA-201ENST00000354513 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 TMEM106CQ9BVX2 250 aa19.6■□□□□ 0.73
PDGFA-201ENST00000354513 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
PDGFA-201ENST00000354513 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
PDGFA-201ENST00000354513 RRP1BQ14684 758 aaKnown RBP19.59■□□□□ 0.73
PDGFA-201ENST00000354513 PARK7Q99497 189 aaKnown RBP19.59■□□□□ 0.73
PDGFA-201ENST00000354513 MYPNQ86TC9 1320 aa19.58■□□□□ 0.73
PDGFA-201ENST00000354513 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.73
PDGFA-201ENST00000354513 PICK1Q9NRD5 415 aa19.58■□□□□ 0.73
PDGFA-201ENST00000354513 GABRQQ9UN88 632 aa19.58■□□□□ 0.73
PDGFA-201ENST00000354513 TBC1D12O60347 775 aa19.57■□□□□ 0.72
PDGFA-201ENST00000354513 PRKCZQ05513 592 aa19.57■□□□□ 0.72
PDGFA-201ENST00000354513 SLC4A8Q2Y0W8 1093 aa19.57■□□□□ 0.72
PDGFA-201ENST00000354513 GADL1Q6ZQY3 521 aa19.57■□□□□ 0.72
PDGFA-201ENST00000354513 SSH3Q8TE77 659 aa19.57■□□□□ 0.72
PDGFA-201ENST00000354513 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
PDGFA-201ENST00000354513 DBNDD2Q9BQY9 259 aa19.56■□□□□ 0.72
PDGFA-201ENST00000354513 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
PDGFA-201ENST00000354513 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
PDGFA-201ENST00000354513 FMNL1O95466 1100 aaPredicted RBP19.55■□□□□ 0.72
PDGFA-201ENST00000354513 RLBP1P12271 317 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDGFA-201ENST00000354513 TNNI3KQ59H18 835 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 TREML2Q5T2D2 321 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 FASTKD5Q7L8L6 764 aaKnown RBP19.55■□□□□ 0.72
PDGFA-201ENST00000354513 ADGRA1Q86SQ6 560 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 SH3RF3Q8TEJ3 882 aaPredicted RBP19.55■□□□□ 0.72
PDGFA-201ENST00000354513 GPR108Q9NPR9 543 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 RAI14Q9P0K7 980 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 FPGT-TNNI3KV9GXZ4 949 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 NAV1Q8NEY1 1877 aa19.55■□□□□ 0.72
PDGFA-201ENST00000354513 TRIM75PA6NK02 468 aa19.54■□□□□ 0.72
PDGFA-201ENST00000354513 UQCRFS1P1P0C7P4 283 aa19.54■□□□□ 0.72
PDGFA-201ENST00000354513 GRK4P32298 578 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms