RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 PDHXO00330 501 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 BTDP43251 543 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 DDX4Q9NQI0 724 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 MROH7-TTC4A0A0A0MT08 1334 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 ADGRA2Q96PE1 1338 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 MYO5AQ9Y4I1 1855 aaKnown RBP17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 DDTLA6NHG4 134 aaPredicted RBP17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 EN2P19622 333 aaPredicted RBP17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 MAP3K10Q02779 954 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 MECOMQ03112 1051 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 NBPF11Q86T75 865 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 ZNF384Q8TF68 577 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 HMG20BQ9P0W2 317 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
PRPF40A-201ENST00000354363 ATAD5Q96QE3 1844 aa17.86■□□□□ 0.45
PRPF40A-201ENST00000354363 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
PRPF40A-201ENST00000354363 SCYL3Q8IZE3 742 aa17.86■□□□□ 0.45
PRPF40A-201ENST00000354363 TMEM106CQ9BVX2 250 aa17.86■□□□□ 0.45
PRPF40A-201ENST00000354363 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 CXCL11O14625 94 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 GNRH1P01148 92 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 SLURP2P0DP57 97 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 CTGFP29279 349 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 ARID4AP29374 1257 aaPredicted RBP17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.456e-8■□□□□ 11.3
PRPF40A-201ENST00000354363 PICALMQ13492 652 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 PI16Q6UXB8 463 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 SPATA5Q8NB90 893 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 CDK5RAP2Q96SN8 1893 aa17.85■□□□□ 0.45
PRPF40A-201ENST00000354363 PTPRAP18433 802 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 RHBDL3P58872 404 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 GORABQ5T7V8 394 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 GPAT2Q6NUI2 795 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 ZHX2Q9Y6X8 837 aa17.84■□□□□ 0.45
PRPF40A-201ENST00000354363 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 PRMT2P55345 433 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 TBC1D9Q6ZT07 1266 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 SH3TC2Q8TF17 1288 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 PICK1Q9NRD5 415 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 DOCK3Q8IZD9 2030 aa17.83■□□□□ 0.45
PRPF40A-201ENST00000354363 MAST2Q6P0Q8 1798 aa17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 PSMC4P43686 418 aa17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 TRIM47Q96LD4 638 aa17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
PRPF40A-201ENST00000354363 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 LDHCP07864 332 aa17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 MCAMP43121 646 aa17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 SRRDQ9UH36 339 aa17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
PRPF40A-201ENST00000354363 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 CYP2C8P10632 490 aa17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 BCRP11274 1271 aa17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 GSTO1P78417 241 aa17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 POLA2Q14181 598 aa17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 FASTKD5Q7L8L6 764 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 RAI14Q9P0K7 980 aa17.81■□□□□ 0.44
PRPF40A-201ENST00000354363 SIPA1L1O43166 1804 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 TBC1D12O60347 775 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 OSBPP22059 807 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 FMNL1O95466 1100 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 HOXD10P28358 340 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 SSH3Q8TE77 659 aa17.8■□□□□ 0.44
PRPF40A-201ENST00000354363 TNNI3KQ59H18 835 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 CCDC84Q86UT8 332 aaPredicted RBP17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 SLC45A1Q9Y2W3 748 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 FPGT-TNNI3KV9GXZ4 949 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
PRPF40A-201ENST00000354363 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 FAM196BA6NMK8 535 aa17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 RAET1EQ8TD07 263 aa17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF40A-201ENST00000354363 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 MTFR1Q15390 333 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 TEX11Q8IYF3 940 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 GCC1Q96CN9 775 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 SNRKQ9NRH2 765 aa17.77■□□□□ 0.44
PRPF40A-201ENST00000354363 GRK4P32298 578 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms