RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 MMP14P50281 582 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SYCP2LQ5T4T6 812 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MEI1Q5TIA1 1274 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 RNF19BQ6ZMZ0 732 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 FBF1Q8TES7 1133 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 C1orf159Q96HA4 380 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 EHMT1Q9H9B1 1298 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 GINM1Q9NU53 330 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 USP21Q9UK80 565 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 DHX57Q6P158 1386 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TLR3O15455 904 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 FOXO3O43524 673 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 AKAP10O43572 662 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 ATE1O95260 518 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CNOT4O95628 575 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 HRGP04196 525 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 USP46P62068 366 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CBX2Q14781 532 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 DDR2Q16832 855 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PRPF40BQ6NWY9 871 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SCUBE3Q8IX30 993 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 DMRTB1Q96MA1 342 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 DNAJC7Q99615 494 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 GSX2Q9BZM3 304 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SALL4Q9UJQ4 1053 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 FBXO9Q9UK97 447 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHB11Q9Y5F2 797 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 KIAA0586Q9BVV6 1533 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 FRS3O43559 492 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SCGB1D2O95969 90 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CREB1P16220 341 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 EIF1AXP47813 144 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRAPPC10P48553 1259 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MECP2P51608 486 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SETQ01105 290 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PABPC4Q13310 644 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TTF1Q15361 905 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SGO2Q562F6 1265 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZNF362Q5T0B9 420 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 DUSP27Q5VZP5 1158 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 NUDT18Q6ZVK8 323 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 HNRNPLLQ8WVV9 542 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SMARCC1Q92922 1105 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 NINJ1Q92982 152 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 OSBP2Q969R2 916 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 EXOC2Q96KP1 924 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 SLC13A1Q9BZW2 595 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRIM35Q9UPQ4 493 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGB3Q9Y5G1 929 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 BRD4O60885 1362 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ALDH1L1O75891 902 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 REC8O95072 547 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 PGM3O95394 542 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 PDGFAP04085 211 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZBTB48P10074 688 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 C6P13671 934 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TESK1Q15569 626 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 RAB30Q15771 203 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 MSS51Q4VC12 460 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CTU1Q7Z7A3 348 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CENPSQ8N2Z9 138 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZSCAN1Q8NBB4 408 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 RSRC1Q96IZ7 334 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CSRNP1Q96S65 589 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 NRSN2Q9GZP1 204 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 BCAS3Q9H6U6 928 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 SWAP70Q9UH65 585 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 SH3BP1Q9Y3L3 701 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 FAM171A2A8MVW0 826 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 C19orf81C9J6K1 198 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CHL1O00533 1208 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 HOXD8P13378 290 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TARSP26639 723 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ADSLP30566 484 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 POU5F1BQ06416 359 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 SFSWAPQ12872 951 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 RINLQ6ZS11 566 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 EPM2AIP1Q7L775 607 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 EID3Q8N140 333 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TAB3Q8N5C8 712 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TSEN2Q8NCE0 465 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TMPRSS11EQ9UL52 423 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 SMARCA2P51531 1590 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 KIF27Q86VH2 1401 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TNFRSF10AO00220 468 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 AREL1O15033 823 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 SDSP20132 328 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAPK1P28482 360 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CDCA2Q69YH5 1023 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 OTOP3Q7RTS5 596 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 DGLUCYQ7Z3D6 616 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 CHST13Q8NET6 341 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ATOH1Q92858 354 aaPredicted RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ERP27Q96DN0 273 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 PKNOX2Q96KN3 472 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 TMOD2Q9NZR1 351 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 PDP2Q9P2J9 529 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 PPARGC1AQ9UBK2 798 aaKnown RBP2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZMYM5Q9UJ78 669 aa2.72□□□□□ -1.97
SMARCAD1-201ENST00000354268 STXBP5LQ9Y2K9 1186 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms