RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TCHPQ9BT92 498 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 CCDC94Q9BW85 323 aaPredicted RBP18.03■□□□□ 0.48
PTPN11-201ENST00000351677 PKD2L1Q9P0L9 805 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 WDHD1O75717 1129 aaPredicted RBP18.02■□□□□ 0.48
PTPN11-201ENST00000351677 TBC1D8BQ0IIM8 1120 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
PTPN11-201ENST00000351677 RASAL2Q9UJF2 1139 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 A0A1W2PRG0 241 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 LTKP29376 864 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 EVCP57679 992 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 NLRP12P59046 1061 aa18.02■□□□□ 0.48
PTPN11-201ENST00000351677 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
PTPN11-201ENST00000351677 TM6SF1Q9BZW5 370 aa18.02■□□□□ 0.47
PTPN11-201ENST00000351677 SYNRGQ9UMZ2 1314 aa18.02■□□□□ 0.47
PTPN11-201ENST00000351677 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 OPA1O60313 960 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 ATRIPQ8WXE1 791 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 PAIP2Q9BPZ3 127 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 TXKP42681 527 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 SP4Q02446 784 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 KDM5CP41229 1560 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 CAPN2P17655 700 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 PPP2R3AQ06190 1150 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 CCDC65Q8IXS2 484 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 GTF3C6Q969F1 213 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 FAM212AQ96EL1 285 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 TIGD1Q96MW7 591 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 CCNL1Q9UK58 526 aaPredicted RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 PRPHP41219 470 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 DNAJC21Q5F1R6 531 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 IKBKGQ9Y6K9 419 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 KDRP35968 1356 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
PTPN11-201ENST00000351677 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
PTPN11-201ENST00000351677 BEND3Q5T5X7 828 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 MPHOSPH6Q99547 160 aaKnown RBP18■□□□□ 0.47
PTPN11-201ENST00000351677 ZMYND15Q9H091 742 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 EYA3Q99504 573 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
PTPN11-201ENST00000351677 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
PTPN11-201ENST00000351677 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
PTPN11-201ENST00000351677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.471e-7■■■□□ 18.4
PTPN11-201ENST00000351677 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
PTPN11-201ENST00000351677 MRPL12P52815 198 aaKnown RBP17.99■□□□□ 0.47
PTPN11-201ENST00000351677 STAMQ92783 540 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 UIMC1Q96RL1 719 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 MROH5Q6ZUA9 1318 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 SMIM23A6NLE4 172 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 CHMP2AO43633 222 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 GSTA5Q7RTV2 222 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 DPH6Q7L8W6 267 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 CCDC50Q8IVM0 306 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 NFE2L3Q9Y4A8 694 aa17.99■□□□□ 0.47
PTPN11-201ENST00000351677 POSTNQ15063 836 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 ERO1AQ96HE7 468 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 IMPG2Q9BZV3 1241 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 PAK1Q13153 545 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 MLKLQ8NB16 471 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 TRMT44Q8IYL2 757 aaKnown RBP17.98■□□□□ 0.47
PTPN11-201ENST00000351677 CMTR1Q8N1G2 835 aaKnown RBP17.98■□□□□ 0.47
PTPN11-201ENST00000351677 ERCC3P19447 782 aa17.98■□□□□ 0.47
PTPN11-201ENST00000351677 PHKG2P15735 406 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 PNOCQ13519 176 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 FAM47AQ5JRC9 791 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 LONRF3Q496Y0 759 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 CNNM4Q6P4Q7 775 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 MBD5Q9P267 1494 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 GRIPAP1Q4V328 841 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 TAB2Q9NYJ8 693 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 RPL13P26373 211 aaKnown RBP17.97■□□□□ 0.47
PTPN11-201ENST00000351677 SELENOSQ9BQE4 189 aa17.97■□□□□ 0.47
PTPN11-201ENST00000351677 NR1I2O75469 434 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 VAV2P52735 878 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 CARD6Q9BX69 1037 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 BLZF1Q9H2G9 400 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 IVLP07476 585 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 CTSWP56202 376 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 PLCB3Q01970 1234 aa17.96■□□□□ 0.47
PTPN11-201ENST00000351677 ZEB2O60315 1214 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms