RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NKIRAS1Q9NYS0 192 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 LPXNO60711 386 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 PDE6BP35913 854 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 GEN1Q17RS7 908 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 UBLCP1Q8WVY7 318 aaPredicted RBP25.85■■□□□ 1.73
NPAS3-201ENST00000346562 BTG4Q9NY30 223 aa25.85■■□□□ 1.73
NPAS3-201ENST00000346562 GCP02774 474 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 PPP1R21Q6ZMI0 780 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 PDE8AO60658 829 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 AZI2Q9H6S1 392 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 PCDHB15Q9Y5E8 787 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 MYL5Q02045 173 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 ASIC2Q16515 512 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 CCDC122Q5T0U0 273 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 FAM184BQ9ULE4 1060 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 IP6K1Q92551 441 aa25.84■■□□□ 1.73
NPAS3-201ENST00000346562 INTS4Q96HW7 963 aaKnown RBP25.84■■□□□ 1.73
NPAS3-201ENST00000346562 TLDC2A0PJX2 215 aa25.83■■□□□ 1.73
NPAS3-201ENST00000346562 IPO4Q8TEX9 1081 aaKnown RBP25.83■■□□□ 1.73
NPAS3-201ENST00000346562 ZNF408Q9H9D4 720 aa25.83■■□□□ 1.73
NPAS3-201ENST00000346562 M0QZ92 97 aa25.83■■□□□ 1.73
NPAS3-201ENST00000346562 WDR66Q8TBY9 1149 aa25.83■■□□□ 1.73
NPAS3-201ENST00000346562 ARID4AP29374 1257 aaPredicted RBP25.83■■□□□ 1.73
NPAS3-201ENST00000346562 ERCC6LQ2NKX8 1250 aa25.83■■□□□ 1.73
NPAS3-201ENST00000346562 EYA2O00167 538 aa25.83■■□□□ 1.72
NPAS3-201ENST00000346562 MYCLP12524 364 aaPredicted RBP25.83■■□□□ 1.72
NPAS3-201ENST00000346562 UAP1Q16222 522 aaPredicted RBP25.83■■□□□ 1.72
NPAS3-201ENST00000346562 NBPF11Q86T75 865 aa25.83■■□□□ 1.72
NPAS3-201ENST00000346562 UBL4BQ8N7F7 174 aa25.83■■□□□ 1.72
NPAS3-201ENST00000346562 CIB2O75838 187 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 PIK3AP1Q6ZUJ8 805 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 ZFP91Q96JP5 570 aaPredicted RBP25.82■■□□□ 1.72
NPAS3-201ENST00000346562 ARMT1Q9H993 441 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 PFDN4Q9NQP4 134 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 DDX21Q9NR30 783 aaKnown RBP eCLIP25.82■■□□□ 1.72
NPAS3-201ENST00000346562 STIM2Q9P246 746 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 SH3TC1Q8TE82 1336 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 H0YIN7 160 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 ADCY7P51828 1080 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 DPP8Q6V1X1 898 aaPredicted RBP25.82■■□□□ 1.72
NPAS3-201ENST00000346562 AFAP1L2Q8N4X5 818 aa25.82■■□□□ 1.72
NPAS3-201ENST00000346562 CHMLP26374 656 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 DNM2P50570 870 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 GPATCH11Q8N954 259 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 NCAPH2Q6IBW4 605 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 BEGAINQ9BUH8 593 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 RPS6KB1P23443 525 aa25.81■■□□□ 1.72
NPAS3-201ENST00000346562 RFX1P22670 979 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 BAG1Q99933 345 aaPredicted RBP25.8■■□□□ 1.72
NPAS3-201ENST00000346562 A0A1B0GUL7 405 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 B4E1Z4 1266 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 EIF4G3O43432 1585 aaKnown RBP25.8■■□□□ 1.72
NPAS3-201ENST00000346562 NSMCE1Q8WV22 266 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 EYA1Q99502 592 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 LZTS2Q9BRK4 669 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 RHOXF2BP0C7M4 288 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 FAM160A1Q05DH4 1040 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 RHOXF2Q9BQY4 288 aa25.8■■□□□ 1.72
NPAS3-201ENST00000346562 METTL22Q9BUU2 404 aaPredicted RBP25.8■■□□□ 1.72
NPAS3-201ENST00000346562 FYB2Q5VWT5 728 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 CCDC125Q86Z20 511 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 VPS52Q8N1B4 723 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 TBC1D31Q96DN5 1066 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 NACA2Q9H009 215 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 ZRANB1Q9UGI0 708 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 TNNI3KQ59H18 835 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 LARGE2Q8N3Y3 721 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 FPGT-TNNI3KV9GXZ4 949 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 ASXL2Q76L83 1435 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 ITIH3Q06033 890 aa25.79■■□□□ 1.72
NPAS3-201ENST00000346562 GABPAQ06546 454 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 INTS8Q75QN2 995 aaKnown RBP25.78■■□□□ 1.72
NPAS3-201ENST00000346562 PODXL2Q9NZ53 605 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 CETN3O15182 167 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 ACTN4O43707 911 aaKnown RBP25.78■■□□□ 1.72
NPAS3-201ENST00000346562 VAMP4O75379 141 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 KRT25Q7Z3Z0 450 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 TBC1D8BQ0IIM8 1120 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 BABAM1Q9NWV8 329 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 RAPGEF6Q8TEU7 1601 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 CAPN2P17655 700 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 CYP26C1Q6V0L0 522 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 VPS18Q9P253 973 aa25.78■■□□□ 1.72
NPAS3-201ENST00000346562 ZNF365Q70YC5 407 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 FAM89AQ96GI7 184 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 EBAG9O00559 213 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 TCIRG1Q13488 830 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 FAM76AQ8TAV0 307 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 XAGE2Q96GT9 111 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 CCDC87Q9NVE4 849 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.77■■□□□ 1.72
NPAS3-201ENST00000346562 KMT5BQ4FZB7 885 aa25.77■■□□□ 1.72
NPAS3-201ENST00000346562 GPATCH8Q9UKJ3 1502 aaKnown RBP25.77■■□□□ 1.72
NPAS3-201ENST00000346562 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
NPAS3-201ENST00000346562 TXKP42681 527 aa25.76■■□□□ 1.72
NPAS3-201ENST00000346562 SYT10Q6XYQ8 523 aa25.76■■□□□ 1.72
NPAS3-201ENST00000346562 LLPHQ9BRT6 129 aaKnown RBP25.76■■□□□ 1.72
NPAS3-201ENST00000346562 UTP11Q9Y3A2 253 aaKnown RBP25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms