RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 MGAMO43451 1857 aa21.22■□□□□ 0.99
TRA2B-202ENST00000342294 PTPRAP18433 802 aa21.22■□□□□ 0.99
TRA2B-202ENST00000342294 SCYL3Q8IZE3 742 aa21.22■□□□□ 0.99
TRA2B-202ENST00000342294 KLHDC4Q8TBB5 520 aa21.22■□□□□ 0.99
TRA2B-202ENST00000342294 PAWRQ96IZ0 340 aaKnown RBP21.22■□□□□ 0.99
TRA2B-202ENST00000342294 LAMA3Q16787 3333 aa21.22■□□□□ 0.99
TRA2B-202ENST00000342294 TNPO2O14787 897 aaKnown RBP21.21■□□□□ 0.99
TRA2B-202ENST00000342294 MAP3K10Q02779 954 aa21.21■□□□□ 0.99
TRA2B-202ENST00000342294 USP40Q9NVE5 1235 aa21.21■□□□□ 0.99
TRA2B-202ENST00000342294 PRDX5P30044 214 aa21.2■□□□□ 0.98
TRA2B-202ENST00000342294 DIS3LQ8TF46 1054 aaKnown RBP21.2■□□□□ 0.98
TRA2B-202ENST00000342294 GADL1Q6ZQY3 521 aa21.19■□□□□ 0.98
TRA2B-202ENST00000342294 NECAB2Q7Z6G3 386 aa21.19■□□□□ 0.98
TRA2B-202ENST00000342294 PICK1Q9NRD5 415 aa21.19■□□□□ 0.98
TRA2B-202ENST00000342294 LPIN2Q92539 896 aa21.18■□□□□ 0.98
TRA2B-202ENST00000342294 IDI2Q9BXS1 227 aa21.18■□□□□ 0.98
TRA2B-202ENST00000342294 ENTPD3O75355 529 aa21.17■□□□□ 0.98
TRA2B-202ENST00000342294 SLC5A1P13866 664 aa21.17■□□□□ 0.98
TRA2B-202ENST00000342294 SH3BP5LQ7L8J4 393 aa21.17■□□□□ 0.98
TRA2B-202ENST00000342294 ANKLE1Q8NAG6 615 aa21.17■□□□□ 0.98
TRA2B-202ENST00000342294 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRA2B-202ENST00000342294 SALL2Q9Y467 1007 aaPredicted RBP21.17■□□□□ 0.98
TRA2B-202ENST00000342294 ALPK3Q96L96 1907 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 SALL1Q9NSC2 1324 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 EYA2O00167 538 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 LDHBP07195 334 aaKnown RBP21.16■□□□□ 0.98
TRA2B-202ENST00000342294 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
TRA2B-202ENST00000342294 RFX5P48382 616 aaPredicted RBP21.16■□□□□ 0.98
TRA2B-202ENST00000342294 RGS3P49796 1198 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 LRIT3Q3SXY7 679 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 DEFB123Q8N688 67 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 SMCR8Q8TEV9 937 aaPredicted RBP21.16■□□□□ 0.98
TRA2B-202ENST00000342294 COA7Q96BR5 231 aa21.16■□□□□ 0.98
TRA2B-202ENST00000342294 RFX7Q2KHR2 1363 aa21.15■□□□□ 0.98
TRA2B-202ENST00000342294 CTNND1O60716 968 aaKnown RBP21.15■□□□□ 0.98
TRA2B-202ENST00000342294 C7orf61Q8IZ16 206 aa21.15■□□□□ 0.98
TRA2B-202ENST00000342294 ANKRD13CQ8N6S4 541 aa21.15■□□□□ 0.98
TRA2B-202ENST00000342294 ZMYND8Q9ULU4 1186 aaPredicted RBP21.15■□□□□ 0.98
TRA2B-202ENST00000342294 AGTPBP1Q9UPW5 1226 aa21.15■□□□□ 0.98
TRA2B-202ENST00000342294 STXBP5LQ9Y2K9 1186 aa21.15■□□□□ 0.98
TRA2B-202ENST00000342294 SLURP2P0DP57 97 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 FAM110CQ1W6H9 321 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 Q7L0L9 218 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 ATG9AQ7Z3C6 839 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 USP44Q9H0E7 712 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 MTMR10Q9NXD2 777 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 TAOK2Q9UL54 1235 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 AK9Q5TCS8 1911 aa21.14■□□□□ 0.97
TRA2B-202ENST00000342294 GAKO14976 1311 aa21.13■□□□□ 0.97
TRA2B-202ENST00000342294 TRIM75PA6NK02 468 aa21.13■□□□□ 0.97
TRA2B-202ENST00000342294 GJD2Q9UKL4 321 aa21.13■□□□□ 0.97
TRA2B-202ENST00000342294 LRRFIP2Q9Y608 721 aaKnown RBP21.13■□□□□ 0.97
TRA2B-202ENST00000342294 DDTLA6NHG4 134 aaPredicted RBP21.12■□□□□ 0.97
TRA2B-202ENST00000342294 ZBTB22O15209 634 aa21.12■□□□□ 0.97
TRA2B-202ENST00000342294 HMGCRP04035 888 aa21.12■□□□□ 0.97
TRA2B-202ENST00000342294 TREML2Q5T2D2 321 aa21.12■□□□□ 0.97
TRA2B-202ENST00000342294 NBPF3Q9H094 633 aa21.12■□□□□ 0.97
TRA2B-202ENST00000342294 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.12■□□□□ 0.97
TRA2B-202ENST00000342294 DOCK3Q8IZD9 2030 aa21.12■□□□□ 0.97
TRA2B-202ENST00000342294 RPTORQ8N122 1335 aa21.11■□□□□ 0.97
TRA2B-202ENST00000342294 MAGEA10P43363 369 aaPredicted RBP21.11■□□□□ 0.97
TRA2B-202ENST00000342294 CCDC84Q86UT8 332 aaPredicted RBP21.11■□□□□ 0.97
TRA2B-202ENST00000342294 DDX4Q9NQI0 724 aaKnown RBP21.11■□□□□ 0.97
TRA2B-202ENST00000342294 PTPRFP10586 1907 aa21.11■□□□□ 0.97
TRA2B-202ENST00000342294 SEMA3EO15041 775 aa21.1■□□□□ 0.97
TRA2B-202ENST00000342294 TRIM32Q13049 653 aa21.1■□□□□ 0.97
TRA2B-202ENST00000342294 ZSCAN29Q8IWY8 852 aaPredicted RBP21.1■□□□□ 0.97
TRA2B-202ENST00000342294 TDHQ8IZJ6 230 aa21.1■□□□□ 0.97
TRA2B-202ENST00000342294 HMX1Q9NP08 348 aaPredicted RBP21.1■□□□□ 0.97
TRA2B-202ENST00000342294 GNL3LQ9NVN8 582 aaKnown RBP21.1■□□□□ 0.97
TRA2B-202ENST00000342294 PNMA3Q9UL41 463 aa21.1■□□□□ 0.97
TRA2B-202ENST00000342294 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
TRA2B-202ENST00000342294 PHIPQ8WWQ0 1821 aa21.09■□□□□ 0.97
TRA2B-202ENST00000342294 DOCK2Q92608 1830 aa21.09■□□□□ 0.97
TRA2B-202ENST00000342294 SYN1P17600 705 aa21.09■□□□□ 0.97
TRA2B-202ENST00000342294 ATP2B3Q16720 1220 aa21.09■□□□□ 0.97
TRA2B-202ENST00000342294 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
TRA2B-202ENST00000342294 PROCA1Q8NCQ7 364 aaPredicted RBP21.09■□□□□ 0.97
TRA2B-202ENST00000342294 FAM163AQ96GL9 167 aaPredicted RBP21.09■□□□□ 0.97
TRA2B-202ENST00000342294 OGDHLQ9ULD0 1010 aa21.09■□□□□ 0.97
TRA2B-202ENST00000342294 TBC1D12O60347 775 aa21.08■□□□□ 0.97
TRA2B-202ENST00000342294 PHKA1P46020 1223 aa21.08■□□□□ 0.97
TRA2B-202ENST00000342294 GCLCP48506 637 aaPredicted RBP21.08■□□□□ 0.97
TRA2B-202ENST00000342294 C11orf49Q9H6J7 331 aa21.08■□□□□ 0.97
TRA2B-202ENST00000342294 MYH13Q9UKX3 1938 aa21.08■□□□□ 0.96
TRA2B-202ENST00000342294 FBXO3Q9UK99 471 aa21.07■□□□□ 0.96
TRA2B-202ENST00000342294 DOCK1Q14185 1865 aa21.07■□□□□ 0.96
TRA2B-202ENST00000342294 PTPRCP08575 1304 aa21.06■□□□□ 0.96
TRA2B-202ENST00000342294 CIAO1O76071 339 aa21.06■□□□□ 0.96
TRA2B-202ENST00000342294 MAP3K21Q5TCX8 1036 aa21.06■□□□□ 0.96
TRA2B-202ENST00000342294 CEP126Q9P2H0 1117 aa21.06■□□□□ 0.96
TRA2B-202ENST00000342294 PFASO15067 1338 aa21.05■□□□□ 0.96
TRA2B-202ENST00000342294 SPP2Q13103 211 aa21.05■□□□□ 0.96
TRA2B-202ENST00000342294 ZGPATQ8N5A5 531 aaKnown RBP21.05■□□□□ 0.96
TRA2B-202ENST00000342294 TRIB2Q92519 343 aa21.05■□□□□ 0.96
TRA2B-202ENST00000342294 COL25A1Q9BXS0 654 aaPredicted RBP21.05■□□□□ 0.96
TRA2B-202ENST00000342294 UBE2OQ9C0C9 1292 aaKnown RBP21.05■□□□□ 0.96
TRA2B-202ENST00000342294 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
TRA2B-202ENST00000342294 NPM3O75607 178 aaKnown RBP21.04■□□□□ 0.96
TRA2B-202ENST00000342294 BTDP43251 543 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms