RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PSMA5P28066 241 aa17.6■□□□□ 0.41
LIMK2-203ENST00000340552 DNAJC21Q5F1R6 531 aaKnown RBP17.6■□□□□ 0.41
LIMK2-203ENST00000340552 HNRNPLLQ8WVV9 542 aaKnown RBP17.6■□□□□ 0.41
LIMK2-203ENST00000340552 BPIFA3Q9BQP9 254 aa17.6■□□□□ 0.41
LIMK2-203ENST00000340552 A0A087WUV0 522 aaPredicted RBP17.59■□□□□ 0.41
LIMK2-203ENST00000340552 PHACTR2O75167 634 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 ATP1A3P13637 1013 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
LIMK2-203ENST00000340552 FANCCQ00597 558 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
LIMK2-203ENST00000340552 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 TMEM139Q8IV31 216 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 PNKPQ96T60 521 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 BCL9LQ86UU0 1499 aa17.59■□□□□ 0.41
LIMK2-203ENST00000340552 PPFIA4O75335 1185 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.41
LIMK2-203ENST00000340552 PTPN21Q16825 1174 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 DPF2Q92785 391 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 MAP4K1Q92918 833 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 EVI5LQ96CN4 794 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 L1RE1Q9UN81 338 aa17.58■□□□□ 0.41
LIMK2-203ENST00000340552 EIF3JO75822 258 aaKnown RBP17.58■□□□□ 0.4
LIMK2-203ENST00000340552 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.4
LIMK2-203ENST00000340552 VPS72Q15906 364 aa17.58■□□□□ 0.4
LIMK2-203ENST00000340552 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
LIMK2-203ENST00000340552 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.4
LIMK2-203ENST00000340552 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
LIMK2-203ENST00000340552 SDF4Q9BRK5 362 aa17.58■□□□□ 0.4
LIMK2-203ENST00000340552 GPTP24298 496 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 FOSBP53539 338 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 ABCB6Q9NP58 842 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 MED4Q9NPJ6 270 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 BIN1O00499 593 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 KIF1CO43896 1103 aaKnown RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 USP5P45974 858 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 DBNLQ9UJU6 430 aaKnown RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 LOC102724428A0A0B4J2F2 783 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 SIK1P57059 783 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 ZBTB38Q8NAP3 1195 aaPredicted RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 ALDH8A1Q9H2A2 487 aaPredicted RBP17.57■□□□□ 0.4
LIMK2-203ENST00000340552 HSD3B7Q9H2F3 369 aa17.57■□□□□ 0.4
LIMK2-203ENST00000340552 NUP98P52948 1817 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 NEDD4P46934 1319 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 ME1P48163 572 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 CHMP4BP1P59074 171 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 FAM212AQ96EL1 285 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
LIMK2-203ENST00000340552 FAM204AQ9H8W3 233 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 RAB21Q9UL25 225 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 KCNQ2O43526 872 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 TTLL5Q6EMB2 1281 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
LIMK2-203ENST00000340552 A0A1B0GVL5 298 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 ARHGAP6O43182 974 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 MNAT1P51948 309 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 SKIDA1Q1XH10 827 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
LIMK2-203ENST00000340552 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
LIMK2-203ENST00000340552 PUF60Q9UHX1 559 aaKnown RBP17.55■□□□□ 0.4
LIMK2-203ENST00000340552 PALLDQ8WX93 1383 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 ERVV-1B6SEH8 477 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 EYA2O00167 538 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 ERLIN2O94905 339 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 HNRNPH1P31943 449 aaKnown RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 TOGARAM2Q6ZUX3 1019 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 TMEM232C9JQI7 657 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CUTAO60888 179 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 LIG3P49916 1009 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CASP8Q14790 479 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CNPY4Q8N129 248 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 MSANTD4Q8NCY6 345 aa17.54■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 MRPS27Q92552 414 aaKnown RBP17.54■□□□□ 0.4
LIMK2-203ENST00000340552 DBNDD2Q9BQY9 259 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms