RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SMARCA5O60264 1052 aaPredicted RBP18.64■□□□□ 0.57
PRKN-201ENST00000338468 ENTPD3O75355 529 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.57
PRKN-201ENST00000338468 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 SREBF2Q12772 1141 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 VGLL4Q14135 290 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 MIGA2Q7L4E1 593 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
PRKN-201ENST00000338468 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
PRKN-201ENST00000338468 GPR25O00155 361 aa18.63■□□□□ 0.57
PRKN-201ENST00000338468 TM4SF4P48230 202 aa18.63■□□□□ 0.57
PRKN-201ENST00000338468 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
PRKN-201ENST00000338468 FBXO46Q6PJ61 603 aaPredicted RBP18.63■□□□□ 0.57
PRKN-201ENST00000338468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRKN-201ENST00000338468 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
PRKN-201ENST00000338468 BCL11AQ9H165 835 aa18.63■□□□□ 0.57
PRKN-201ENST00000338468 DDTLA6NHG4 134 aaPredicted RBP18.62■□□□□ 0.57
PRKN-201ENST00000338468 IGSF3O75054 1194 aa18.62■□□□□ 0.57
PRKN-201ENST00000338468 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
PRKN-201ENST00000338468 ZBTB48P10074 688 aaPredicted RBP18.62■□□□□ 0.57
PRKN-201ENST00000338468 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
PRKN-201ENST00000338468 ELP3Q9H9T3 547 aa18.62■□□□□ 0.57
PRKN-201ENST00000338468 ZNF112Q9UJU3 913 aa18.62■□□□□ 0.57
PRKN-201ENST00000338468 IDH1O75874 414 aaKnown RBP18.61■□□□□ 0.57
PRKN-201ENST00000338468 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
PRKN-201ENST00000338468 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 PPP4CP60510 307 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 PICALMQ13492 652 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 DCAF15Q66K64 600 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 SH3RF3Q8TEJ3 882 aaPredicted RBP18.61■□□□□ 0.57
PRKN-201ENST00000338468 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
PRKN-201ENST00000338468 OPTNQ96CV9 577 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 WRNIP1Q96S55 665 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.57
PRKN-201ENST00000338468 SNCAIPQ9Y6H5 919 aa18.61■□□□□ 0.57
PRKN-201ENST00000338468 FKTNO75072 461 aa18.6■□□□□ 0.57
PRKN-201ENST00000338468 INPP5BP32019 993 aa18.6■□□□□ 0.57
PRKN-201ENST00000338468 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
PRKN-201ENST00000338468 AK9Q5TCS8 1911 aa18.6■□□□□ 0.57
PRKN-201ENST00000338468 CDK5RAP2Q96SN8 1893 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 ATP5JP18859 108 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 CYP7A1P22680 504 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
PRKN-201ENST00000338468 MAP3K10Q02779 954 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 TEX11Q8IYF3 940 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 CFHR5Q9BXR6 569 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 CSADQ9Y600 493 aa18.59■□□□□ 0.57
PRKN-201ENST00000338468 COL2A1P02458 1487 aaPredicted RBP18.58■□□□□ 0.57
PRKN-201ENST00000338468 MANSC4A6NHS7 340 aaPredicted RBP18.58■□□□□ 0.56
PRKN-201ENST00000338468 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
PRKN-201ENST00000338468 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.56
PRKN-201ENST00000338468 MAGEB6Q8N7X4 407 aa18.58■□□□□ 0.56
PRKN-201ENST00000338468 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
PRKN-201ENST00000338468 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.56
PRKN-201ENST00000338468 OSBPL5Q9H0X9 879 aaPredicted RBP18.58■□□□□ 0.56
PRKN-201ENST00000338468 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.56
PRKN-201ENST00000338468 TESPA1A2RU30 521 aaPredicted RBP18.57■□□□□ 0.56
PRKN-201ENST00000338468 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRKN-201ENST00000338468 GOLIM4O00461 696 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 BAG3O95817 575 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 ZSCAN29Q8IWY8 852 aaPredicted RBP18.57■□□□□ 0.56
PRKN-201ENST00000338468 HAUS7Q99871 368 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 PTPN18Q99952 460 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 FOCADQ5VW36 1801 aa18.57■□□□□ 0.56
PRKN-201ENST00000338468 TTF1Q15361 905 aaPredicted RBP18.56■□□□□ 0.56
PRKN-201ENST00000338468 ERO1BQ86YB8 467 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 MIGA1Q8NAN2 632 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 TGFBRAP1Q8WUH2 860 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 OTUD5Q96G74 571 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 R3HDMLQ9H3Y0 253 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
PRKN-201ENST00000338468 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 PDE6AP16499 860 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 PLCG2P16885 1265 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 INHBEP58166 350 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 NOL9Q5SY16 702 aaKnown RBP18.55■□□□□ 0.56
PRKN-201ENST00000338468 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 NOL10Q9BSC4 688 aaKnown RBP18.55■□□□□ 0.56
PRKN-201ENST00000338468 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
PRKN-201ENST00000338468 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
PRKN-201ENST00000338468 HTTP42858 3142 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 FLT1P17948 1338 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 TBC1D12O60347 775 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 HDAC1Q13547 482 aaPredicted RBP18.54■□□□□ 0.56
PRKN-201ENST00000338468 TMED8Q6PL24 325 aaPredicted RBP18.54■□□□□ 0.56
PRKN-201ENST00000338468 MAPKAPK5Q8IW41 473 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 BRI3BPQ8WY22 251 aa18.54■□□□□ 0.56
PRKN-201ENST00000338468 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
PRKN-201ENST00000338468 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 IRF6O14896 467 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 CHGBP05060 677 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 PPIL2Q13356 520 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 SLC9C2Q5TAH2 1124 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms