RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.38
CDK5RAP3-201ENST00000338399 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MFSD6Q6ZSS7 791 aa17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
CDK5RAP3-201ENST00000338399 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 B4E1Z4 1266 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 LARGE1O95461 756 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 VIL1P09327 827 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 USP17L8P0C7I0 530 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MCM5P33992 734 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 FGD1P98174 961 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PRC1O43663 620 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CYP2D6P10635 497 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.389e-32■■■■□ 20.3
CDK5RAP3-201ENST00000338399 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 EVX2Q03828 476 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 MYH1P12882 1939 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ANTXR2P58335 489 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CXCL9Q07325 125 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CUL4AQ13619 759 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 BRF1Q92994 677 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 KRT23Q9C075 422 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PRELPP51888 382 aa17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ME3Q16798 604 aa17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SERPINA10Q9UK55 444 aa17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 FLT1P17948 1338 aa17.42■□□□□ 0.38
CDK5RAP3-201ENST00000338399 KDM4AO75164 1064 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CIAPIN1Q6FI81 312 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 GMLQ99445 158 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 AGXT2Q9BYV1 514 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
CDK5RAP3-201ENST00000338399 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-201ENST00000338399 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PICALMQ13492 652 aa17.4■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
CDK5RAP3-201ENST00000338399 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-201ENST00000338399 PRDM1O75626 825 aa17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 FBXL16Q8N461 479 aa17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 NECAB1Q8N987 351 aa17.39■□□□□ 0.38
CDK5RAP3-201ENST00000338399 FGRP09769 529 aa17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DDIT3P35638 169 aa17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PLCD1P51178 756 aa17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 STK3Q13188 491 aa17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 INTS4Q96HW7 963 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DDX4Q9NQI0 724 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PCP11498 1178 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ST3GAL1Q11201 340 aa17.38■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TNIP1Q15025 636 aa17.38■□□□□ 0.37
CDK5RAP3-201ENST00000338399 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PDE4BQ07343 736 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ESR2Q92731 530 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 CACNB3P54284 484 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 NFIAQ12857 509 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PRMT6Q96LA8 375 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms