RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 TAF5LO75529 589 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
HDAC5-202ENST00000336057 SELENOOQ9BVL4 669 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 VPS16Q9H269 839 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 CAPN2P17655 700 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 TRIM14Q14142 442 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 POSTNQ15063 836 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 XPO4Q9C0E2 1151 aaKnown RBP17.76■□□□□ 0.43
HDAC5-202ENST00000336057 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 OPA1O60313 960 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 PRDM1O75626 825 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 TBC1D5Q92609 795 aa17.76■□□□□ 0.43
HDAC5-202ENST00000336057 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
HDAC5-202ENST00000336057 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
HDAC5-202ENST00000336057 PROSER3Q2NL68 480 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 JAG2Q9Y219 1238 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 GOLGA6L10A0A0M3HER8 536 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 ELF2Q15723 593 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 KIAA0753Q2KHM9 967 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 TTC38Q5R3I4 469 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 DHX37Q8IY37 1157 aaKnown RBP17.75■□□□□ 0.43
HDAC5-202ENST00000336057 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
HDAC5-202ENST00000336057 ARID5AQ03989 594 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
HDAC5-202ENST00000336057 MROH5Q6ZUA9 1318 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 PPP1R2P41236 205 aa17.75■□□□□ 0.43
HDAC5-202ENST00000336057 CARD6Q9BX69 1037 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 VPS18Q9P253 973 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 KCNJ14Q9UNX9 436 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 PRR36Q9H6K5 1346 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 CPSF1Q10570 1443 aaKnown RBP17.74■□□□□ 0.43
HDAC5-202ENST00000336057 LETM2Q2VYF4 491 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 ADCY9O60503 1353 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 UNC13BO14795 1591 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 PARP1P09874 1014 aaKnown RBP17.74■□□□□ 0.43
HDAC5-202ENST00000336057 RSPH14Q9UHP6 348 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 PFKFB1P16118 471 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 HDXQ7Z353 690 aa17.74■□□□□ 0.43
HDAC5-202ENST00000336057 AKNAD1Q5T1N1 836 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 PLCD4Q9BRC7 762 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 RTCBQ9Y3I0 505 aaKnown RBP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 ROBO2Q9HCK4 1378 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 HIBADHP31937 336 aaKnown RBP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 TUBB2AQ13885 445 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 CYP26C1Q6V0L0 522 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 SV2BQ7L1I2 683 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 ZNF622Q969S3 477 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 NAPGQ99747 312 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-202ENST00000336057 TUBB2BQ9BVA1 445 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 ERBB4Q15303 1308 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 PHACTR2O75167 634 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
HDAC5-202ENST00000336057 LRMPQ12912 555 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 FERMT2Q96AC1 680 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 TLR7Q9NYK1 1049 aaKnown RBP17.72■□□□□ 0.43
HDAC5-202ENST00000336057 EZRP15311 586 aaKnown RBP17.72■□□□□ 0.43
HDAC5-202ENST00000336057 PAK1Q13153 545 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 NOC4LQ9BVI4 516 aaKnown RBP17.72■□□□□ 0.43
HDAC5-202ENST00000336057 PNOCQ13519 176 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 MAPK8IP1Q9UQF2 711 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 PDE4DQ08499 809 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 SCRN1Q12765 414 aa17.72■□□□□ 0.43
HDAC5-202ENST00000336057 KRT13P13646 458 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 CCDC174Q6PII3 467 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 MTX1Q13505 466 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 TSGA10Q9BZW7 698 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 FGAP02671 866 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
HDAC5-202ENST00000336057 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
HDAC5-202ENST00000336057 CMA1P23946 247 aa17.71■□□□□ 0.42
HDAC5-202ENST00000336057 TMTC1Q8IUR5 882 aa17.71■□□□□ 0.42
HDAC5-202ENST00000336057 PLVAPQ9BX97 442 aa17.71■□□□□ 0.42
HDAC5-202ENST00000336057 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 TSC1Q92574 1164 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 ABCC3O15438 1527 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 VAV2P52735 878 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 SPECC1LQ69YQ0 1117 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 ZC3H12CQ9C0D7 883 aaKnown RBP17.7■□□□□ 0.42
HDAC5-202ENST00000336057 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
HDAC5-202ENST00000336057 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
HDAC5-202ENST00000336057 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms