RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ARID5AQ03989 594 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 CCDC65Q8IXS2 484 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 UBE2Q2Q8WVN8 375 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 BICD1Q96G01 975 aa19.25■□□□□ 0.67
TRAPPC11-201ENST00000334690 IGSF1Q8N6C5 1336 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 PRDM15P57071 1507 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 CCT6AP40227 531 aaKnown RBP19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 SPATA5Q8NB90 893 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 RASAL2Q9UJF2 1139 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 RIOK3O14730 519 aaKnown RBP19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 PHKBQ93100 1093 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 HAUS7Q99871 368 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 EYA3Q99504 573 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 ZMYND15Q9H091 742 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 FAM13AO94988 1023 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 PHKG2P15735 406 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 ACTN2P35609 894 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 PIK3AP1Q6ZUJ8 805 aa19.24■□□□□ 0.67
TRAPPC11-201ENST00000334690 CAPN2P17655 700 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 TSGA10Q9BZW7 698 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 PFKFB2O60825 505 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 PRDM1O75626 825 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 PKP1Q13835 747 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 PLIN2Q99541 437 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 TPCN1Q9ULQ1 816 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 SYNRGQ9UMZ2 1314 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 ARFGAP2Q8N6H7 521 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 VPS16Q9H269 839 aa19.23■□□□□ 0.67
TRAPPC11-201ENST00000334690 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 GIMAP7Q8NHV1 300 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 GLT8D2Q9H1C3 349 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 PDE4DQ08499 809 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 CCDC87Q9NVE4 849 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 POSTNQ15063 836 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 NOC4LQ9BVI4 516 aaKnown RBP19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.674e-6■■■□□ 17.1
TRAPPC11-201ENST00000334690 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 TRAF5O00463 557 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 RHOXF2BP0C7M4 288 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 CAPZA3Q96KX2 299 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 RHOXF2Q9BQY4 288 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 KIAA1468Q9P260 1216 aa19.22■□□□□ 0.67
TRAPPC11-201ENST00000334690 HSPA2P54652 639 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 PAK1Q13153 545 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 TMTC1Q8IUR5 882 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 MYL10Q9BUA6 226 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 CTNND2Q9UQB3 1225 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 GNPATO15228 680 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 PLA2R1Q13018 1463 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 ZNF500O60304 480 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 DTNBO60941 627 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 CYP26C1Q6V0L0 522 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 CNBD1Q8NA66 436 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 MPHOSPH6Q99547 160 aaKnown RBP19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 LSG1Q9H089 658 aaKnown RBP19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
TRAPPC11-201ENST00000334690 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.66
TRAPPC11-201ENST00000334690 TNNC1P63316 161 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 HDXQ7Z353 690 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 CSGALNACT2Q8N6G5 542 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 CCDC77Q9BR77 488 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 TAF5LO75529 589 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 HSPD1P10809 573 aaKnown RBP19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 NAPGQ99747 312 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 METP08581 1390 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 CUL4AQ13619 759 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 NUP58Q9BVL2 599 aa19.2■□□□□ 0.66
TRAPPC11-201ENST00000334690 TRAPPC3LQ5T215 181 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 LZTS2Q9BRK4 669 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 VWA3BQ502W6 1294 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 KRT25Q7Z3Z0 450 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 C17orf53Q8N3J3 647 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 GPT2Q8TD30 523 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 IMPG2Q9BZV3 1241 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
TRAPPC11-201ENST00000334690 UBE4AQ14139 1066 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 RASEFQ8IZ41 740 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 ATRIPQ8WXE1 791 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 STMN4Q9H169 189 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 KRT9P35527 623 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 RSPH14Q9UHP6 348 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 PHACTR2O75167 634 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 GAS2L3Q86XJ1 694 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 DHX37Q8IY37 1157 aaKnown RBP19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 FERMT1Q9BQL6 677 aa19.18■□□□□ 0.66
TRAPPC11-201ENST00000334690 TTLL12Q14166 644 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms