RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ATP8B1O43520 1251 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 TBX2Q13207 712 aaPredicted RBP27.08■■□□□ 1.93
TSKU-201ENST00000333090 TC2NQ8N9U0 490 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 NFE2L3Q9Y4A8 694 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 UBE2Q2LH0YL09 131 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 STX10O60499 249 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 APPP05067 770 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 DESI2Q9BSY9 194 aa27.08■■□□□ 1.93
TSKU-201ENST00000333090 ST5P78524 1137 aa27.07■■□□□ 1.92
TSKU-201ENST00000333090 SPECC1LQ69YQ0 1117 aa27.07■■□□□ 1.92
TSKU-201ENST00000333090 MYL10Q9BUA6 226 aa27.07■■□□□ 1.92
TSKU-201ENST00000333090 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 SH2B2O14492 632 aaPredicted RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 IARSP41252 1262 aaKnown RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 SMC1AQ14683 1233 aaKnown RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 TRMT44Q8IYL2 757 aaKnown RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 ARFGAP3Q9NP61 516 aa27.07■■□□□ 1.92
TSKU-201ENST00000333090 ZNF330Q9Y3S2 320 aaPredicted RBP27.07■■□□□ 1.92
TSKU-201ENST00000333090 GTF2E1P29083 439 aaPredicted RBP27.06■■□□□ 1.92
TSKU-201ENST00000333090 FMR1Q06787 632 aaKnown RBP eCLIP27.06■■□□□ 1.92
TSKU-201ENST00000333090 KARSQ15046 597 aaKnown RBP27.06■■□□□ 1.92
TSKU-201ENST00000333090 ZNF827Q17R98 1081 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.06■■□□□ 1.92
TSKU-201ENST00000333090 B4E1Z4 1266 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 NFXL1Q6ZNB6 911 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 PARD6BQ9BYG5 372 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 UBXN6Q9BZV1 441 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 C4AP0C0L4 1744 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 C4BP0C0L5 1744 aa27.06■■□□□ 1.92
TSKU-201ENST00000333090 TAF7LQ5H9L4 462 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 KRI1Q8N9T8 703 aaKnown RBP27.05■■□□□ 1.92
TSKU-201ENST00000333090 SMARCE1Q969G3 411 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 DHX58Q96C10 678 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 MAN1B1Q9UKM7 699 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 KIF1AQ12756 1690 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 KIFC2Q96AC6 838 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
TSKU-201ENST00000333090 ZBTB43O43298 467 aa27.04■■□□□ 1.92
TSKU-201ENST00000333090 RANBP6O60518 1105 aaKnown RBP27.04■■□□□ 1.92
TSKU-201ENST00000333090 RSRC2Q7L4I2 434 aaKnown RBP27.04■■□□□ 1.92
TSKU-201ENST00000333090 HOOK1Q9UJC3 728 aaKnown RBP27.04■■□□□ 1.92
TSKU-201ENST00000333090 RGS22Q8NE09 1264 aa27.04■■□□□ 1.92
TSKU-201ENST00000333090 CCDC12Q8WUD4 166 aaPredicted RBP27.04■■□□□ 1.92
TSKU-201ENST00000333090 MDM2Q00987 491 aaPredicted RBP27.03■■□□□ 1.92
TSKU-201ENST00000333090 POSTNQ15063 836 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.03■■□□□ 1.92
TSKU-201ENST00000333090 ZSWIM4Q9H7M6 989 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 UBN2Q6ZU65 1347 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 GOLGA8AA7E2F4 631 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 SLC9C2Q5TAH2 1124 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 SLC26A6Q9BXS9 759 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 PRR29P0C7W0 189 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 TOM1L2Q6ZVM7 507 aa27.03■■□□□ 1.92
TSKU-201ENST00000333090 ZNF18P17022 549 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 GRIN1Q05586 938 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 NTRK3Q16288 839 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 TXLNBQ8N3L3 684 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 RABGGTAQ92696 567 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 GOLGA1Q92805 767 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 IRX2Q9BZI1 471 aaPredicted RBP27.02■■□□□ 1.92
TSKU-201ENST00000333090 TULP2O00295 520 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 POLR2DO15514 142 aaKnown RBP27.02■■□□□ 1.92
TSKU-201ENST00000333090 MTF1Q14872 753 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 STK11IPQ8N1F8 1099 aa27.02■■□□□ 1.92
TSKU-201ENST00000333090 TJP1Q07157 1748 aa27.01■■□□□ 1.91
TSKU-201ENST00000333090 CAPN2P17655 700 aa27.01■■□□□ 1.91
TSKU-201ENST00000333090 MCAMP43121 646 aa27.01■■□□□ 1.91
TSKU-201ENST00000333090 GRAMD1CQ8IYS0 662 aa27.01■■□□□ 1.91
TSKU-201ENST00000333090 SAMSN1Q9NSI8 373 aaKnown RBP27.01■■□□□ 1.91
TSKU-201ENST00000333090 MRPL44Q9H9J2 332 aaKnown RBP27.01■■□□□ 1.91
TSKU-201ENST00000333090 STRN4Q9NRL3 753 aa27.01■■□□□ 1.91
TSKU-201ENST00000333090 BTBD18B2RXH4 712 aa27■■□□□ 1.91
TSKU-201ENST00000333090 GPS2Q13227 327 aa27■■□□□ 1.91
TSKU-201ENST00000333090 NOSTRINQ8IVI9 506 aa27■■□□□ 1.91
TSKU-201ENST00000333090 FUT8Q9BYC5 575 aa27■■□□□ 1.91
TSKU-201ENST00000333090 INCENPQ9NQS7 918 aa27■■□□□ 1.91
TSKU-201ENST00000333090 PRDM11Q9NQV5 511 aa27■■□□□ 1.91
TSKU-201ENST00000333090 RAI14Q9P0K7 980 aa27■■□□□ 1.91
TSKU-201ENST00000333090 SERTAD1Q9UHV2 236 aa27■■□□□ 1.91
TSKU-201ENST00000333090 DDX60Q8IY21 1712 aaKnown RBP27■■□□□ 1.91
TSKU-201ENST00000333090 IDH1O75874 414 aaKnown RBP27■■□□□ 1.91
TSKU-201ENST00000333090 ADD2P35612 726 aa27■■□□□ 1.91
TSKU-201ENST00000333090 MLKLQ8NB16 471 aa27■■□□□ 1.91
TSKU-201ENST00000333090 FAM217BQ9NTX9 383 aaPredicted RBP27■■□□□ 1.91
TSKU-201ENST00000333090 SPATA31A3Q5VYP0 1347 aa27■■□□□ 1.91
TSKU-201ENST00000333090 STRCP1A6NGW2 1772 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 GYS2P54840 703 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 TMEM67Q5HYA8 995 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 ENOX1Q8TC92 643 aaKnown RBP26.99■■□□□ 1.91
TSKU-201ENST00000333090 LZTFL1Q9NQ48 299 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 NUTM2AQ8IVF1 878 aaPredicted RBP26.99■■□□□ 1.91
TSKU-201ENST00000333090 IGDCC4Q8TDY8 1250 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 DACH1Q9UI36 760 aa26.99■■□□□ 1.91
TSKU-201ENST00000333090 GLI3P10071 1580 aa26.98■■□□□ 1.91
TSKU-201ENST00000333090 FAM89AQ96GI7 184 aa26.98■■□□□ 1.91
TSKU-201ENST00000333090 TMEM87BQ96K49 555 aa26.98■■□□□ 1.91
TSKU-201ENST00000333090 SOWAHDA6NJG2 315 aa26.98■■□□□ 1.91
TSKU-201ENST00000333090 SSRP1Q08945 709 aaKnown RBP26.98■■□□□ 1.91
TSKU-201ENST00000333090 RAD51AP2Q09MP3 1159 aa26.98■■□□□ 1.91
TSKU-201ENST00000333090 LY9Q9HBG7 655 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms