RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ATP8A2Q9NTI2 1148 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 CTNNA3Q9UI47 895 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 ECM29Q5VYK3 1845 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 WDHD1O75717 1129 aaPredicted RBP22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 EGFRP00533 1210 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 HAND2P61296 217 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 MAPKAPK5Q8IW41 473 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 MTMR14Q8NCE2 650 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 TTC14Q96N46 770 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 TDRD3Q9H7E2 651 aaKnown RBP22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 MKRN1Q9UHC7 482 aaKnown RBP22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 FOCADQ5VW36 1801 aa22.25■■□□□ 1.15
EXOSC3-201ENST00000327304 GIMAP6Q6P9H5 292 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 ZBED3Q96IU2 234 aaPredicted RBP22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 TMX3Q96JJ7 454 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 ZSWIM6Q9HCJ5 1215 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 NAV1Q8NEY1 1877 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 ZC3H4Q9UPT8 1303 aaKnown RBP22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 CACNB3P54284 484 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 GPRC5DQ9NZD1 345 aa22.24■■□□□ 1.15
EXOSC3-201ENST00000327304 LAMA4Q16363 1823 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 FLT1P17948 1338 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 PSMA5P28066 241 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 MMP14P50281 582 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 NFIAQ12857 509 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 CUL4AQ13619 759 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 RBM26Q5T8P6 1007 aaKnown RBP22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 SAMD7Q7Z3H4 446 aa22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 DDX4Q9NQI0 724 aaKnown RBP22.23■■□□□ 1.15
EXOSC3-201ENST00000327304 DDX60LQ5H9U9 1706 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 CYP2D7A0A087X1C5 515 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 PICALMQ13492 652 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 IMMTQ16891 758 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 TBC1D10BQ4KMP7 808 aaPredicted RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 CTR9Q6PD62 1173 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 NBPF3Q9H094 633 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 SMIM22K7EJ46 135 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 CASTP20810 708 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 INTS4Q96HW7 963 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 JAKMIP1Q96N16 626 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 MCM9Q9NXL9 1143 aa22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 SAP30BPQ9UHR5 308 aaKnown RBP22.22■■□□□ 1.15
EXOSC3-201ENST00000327304 CLRN2A0PK11 232 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 USP17L21D6R901 530 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 WNT10BO00744 389 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 ZNF213O14771 459 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 CYP2D6P10635 497 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 EPS15P42566 896 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 EVX2Q03828 476 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 KRT32Q14532 448 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 CYP46A1Q9Y6A2 500 aa22.21■■□□□ 1.15
EXOSC3-201ENST00000327304 MINDY4BA8MYZ0 360 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 H7C1D1 291 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 SLC4A8Q2Y0W8 1093 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 ADCK5Q3MIX3 580 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 SPDYE2Q495Y8 402 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 RUFY3Q7L099 469 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 ZNF70Q9UC06 446 aaPredicted RBP22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 FAM198AQ9UFP1 575 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 LAMB1P07942 1786 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 CTDSPL2Q05D32 466 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 KIF4BQ2VIQ3 1234 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 DPY19L2Q6NUT2 758 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 TBC1D10CQ8IV04 446 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 TRPM4Q8TD43 1214 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 IDI2Q9BXS1 227 aa22.2■■□□□ 1.14
EXOSC3-201ENST00000327304 PPARAQ07869 468 aa22.19■■□□□ 1.14
EXOSC3-201ENST00000327304 ARPP21Q9UBL0 812 aaPredicted RBP22.19■■□□□ 1.14
EXOSC3-201ENST00000327304 MYH1P12882 1939 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 DCAF8L1A6NGE4 600 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 GLTPD2A6NH11 291 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 COL9A3Q14050 684 aaPredicted RBP22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 SBK1Q52WX2 424 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 ZFPM1Q8IX07 1006 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 OSBPL5Q9H0X9 879 aaPredicted RBP22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 TACC3Q9Y6A5 838 aa22.18■■□□□ 1.14
EXOSC3-201ENST00000327304 E7EWF7 191 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 AK2P54819 239 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 NUCB2P80303 420 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 TCP10Q12799 353 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 L3MBTL3Q96JM7 780 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 ALDH8A1Q9H2A2 487 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 PDRG1Q9NUG6 133 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 TMOD2Q9NZR1 351 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 LIMCH1Q9UPQ0 1083 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 ASTN2O75129 1339 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 LMOD1P29536 600 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 C12orf60Q5U649 245 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 STK11IPQ8N1F8 1099 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 VEZTQ9HBM0 779 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
EXOSC3-201ENST00000327304 TCP10L2B9ZVM9 353 aa22.16■■□□□ 1.14
EXOSC3-201ENST00000327304 MYO1BO43795 1136 aa22.16■■□□□ 1.14
EXOSC3-201ENST00000327304 INCENPQ9NQS7 918 aa22.16■■□□□ 1.14
EXOSC3-201ENST00000327304 NPM3O75607 178 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms