RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■□□□ 13.1
VARS2-201ENST00000321897 ATP2C2O75185 946 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 SMC1AQ14683 1233 aaKnown RBP17.36■□□□□ 0.37
VARS2-201ENST00000321897 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 PDE6AP16499 860 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 KMT5BQ4FZB7 885 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 CCDC181Q5TID7 509 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 ZNHIT6Q9NWK9 470 aaKnown RBP17.36■□□□□ 0.37
VARS2-201ENST00000321897 KCNH3Q9ULD8 1083 aa17.36■□□□□ 0.37
VARS2-201ENST00000321897 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 STIM1Q13586 685 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 DPCR1Q3MIW9 517 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.35■□□□□ 0.37
VARS2-201ENST00000321897 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
VARS2-201ENST00000321897 KRT23Q9C075 422 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 PIK3C2BO00750 1634 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 GRAMD1CQ8IYS0 662 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
VARS2-201ENST00000321897 NBPF26B4DH59 902 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 PFKFB1P16118 471 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 NBPF10Q6P3W6 841 aaKnown RBP17.34■□□□□ 0.37
VARS2-201ENST00000321897 NBPF15Q8N660 670 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 GOLGA1Q92805 767 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 PGBD1Q96JS3 809 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 GBP3Q9H0R5 595 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
VARS2-201ENST00000321897 CCDC178Q5BJE1 867 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
VARS2-201ENST00000321897 DESI2Q9BSY9 194 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 TCEAL9Q9UHQ7 104 aa17.34■□□□□ 0.37
VARS2-201ENST00000321897 PDE8AO60658 829 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 PFKFB2O60825 505 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.37
VARS2-201ENST00000321897 FANCCQ00597 558 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 ZNF569Q5MCW4 686 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 CAPZA3Q96KX2 299 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 HINFPQ9BQA5 517 aa17.33■□□□□ 0.37
VARS2-201ENST00000321897 VPS16Q9H269 839 aa17.33■□□□□ 0.36
VARS2-201ENST00000321897 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.36
VARS2-201ENST00000321897 RFC4P35249 363 aa17.33■□□□□ 0.36
VARS2-201ENST00000321897 STOX1Q6ZVD7 989 aa17.33■□□□□ 0.36
VARS2-201ENST00000321897 DSCC1Q9BVC3 393 aa17.33■□□□□ 0.36
VARS2-201ENST00000321897 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 GNPATO15228 680 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 CDC25AP30304 524 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 CTSWP56202 376 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 ZMYM1Q5SVZ6 1142 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 CCDC43Q96MW1 224 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 NFE2L3Q9Y4A8 694 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 TSPY3P0CV98 308 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 TSPY8P0CW00 308 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 USP8P40818 1118 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 PIGBQ92521 554 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 RPGRQ92834 1020 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 SEC63Q9UGP8 760 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 MTIF2P46199 727 aaKnown RBP17.32■□□□□ 0.36
VARS2-201ENST00000321897 CLCN6P51797 869 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 NR5A1Q13285 461 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 ODF2Q5BJF6 829 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 TRIM47Q96LD4 638 aa17.32■□□□□ 0.36
VARS2-201ENST00000321897 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 PDE4BQ07343 736 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
VARS2-201ENST00000321897 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 USP17L21D6R901 530 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 MYL5Q02045 173 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 CFAP74Q9C0B2 1584 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 CCDC148Q8NFR7 591 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
VARS2-201ENST00000321897 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
VARS2-201ENST00000321897 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 MTX1Q13505 466 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 LLPHQ9BRT6 129 aaKnown RBP17.3■□□□□ 0.36
VARS2-201ENST00000321897 SEPT11Q9NVA2 429 aaKnown RBP17.3■□□□□ 0.36
VARS2-201ENST00000321897 IVLP07476 585 aa17.3■□□□□ 0.36
VARS2-201ENST00000321897 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms