RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ZKSCAN4Q969J2 545 aaPredicted RBP26.09■■□□□ 1.77
UBE2D3-201ENST00000321805 COL2A1P02458 1487 aaPredicted RBP26.09■■□□□ 1.77
UBE2D3-201ENST00000321805 FKTNO75072 461 aa26.08■■□□□ 1.77
UBE2D3-201ENST00000321805 PPATQ06203 517 aa26.08■■□□□ 1.77
UBE2D3-201ENST00000321805 PKN2Q16513 984 aaKnown RBP26.08■■□□□ 1.77
UBE2D3-201ENST00000321805 CNKSR2Q8WXI2 1034 aa26.08■■□□□ 1.77
UBE2D3-201ENST00000321805 CYP2E1P05181 493 aaPredicted RBP26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 MAP3K10Q02779 954 aa26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 ZFPM1Q8IX07 1006 aa26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 PTPN18Q99952 460 aa26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 NOL10Q9BSC4 688 aaKnown RBP26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 CCDC8Q9H0W5 538 aaPredicted RBP26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 ZCCHC17Q9NP64 241 aaKnown RBP26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 TLR7Q9NYK1 1049 aaKnown RBP26.07■■□□□ 1.76
UBE2D3-201ENST00000321805 CCL15-CCL14A0A0B4J2E2 113 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 CETPP11597 493 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 INPP5BP32019 993 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 CCL15Q16663 113 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 NAA16Q6N069 864 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 TMED8Q6PL24 325 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 ZSCAN29Q8IWY8 852 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 RHPN1Q8TCX5 695 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 BRI3BPQ8WY22 251 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 KIF1BPQ96EK5 621 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 DDX4Q9NQI0 724 aaKnown RBP26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 SNRKQ9NRH2 765 aa26.06■■□□□ 1.76
UBE2D3-201ENST00000321805 BAG3O95817 575 aa26.05■■□□□ 1.76
UBE2D3-201ENST00000321805 PLCG2P16885 1265 aa26.05■■□□□ 1.76
UBE2D3-201ENST00000321805 SNAPC2Q13487 334 aa26.05■■□□□ 1.76
UBE2D3-201ENST00000321805 AACSQ86V21 672 aa26.05■■□□□ 1.76
UBE2D3-201ENST00000321805 R3HDMLQ9H3Y0 253 aa26.05■■□□□ 1.76
UBE2D3-201ENST00000321805 IRF6O14896 467 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 RAB11FIP3O75154 756 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 ZAP70P43403 619 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 PICALMQ13492 652 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 SH3BP5LQ7L8J4 393 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 SIRT2Q8IXJ6 389 aa26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 CLASRPQ8N2M8 674 aaKnown RBP26.04■■□□□ 1.76
UBE2D3-201ENST00000321805 DDTLA6NHG4 134 aaPredicted RBP26.03■■□□□ 1.76
UBE2D3-201ENST00000321805 CRHR2Q13324 411 aa26.03■■□□□ 1.76
UBE2D3-201ENST00000321805 CCDC85CA6NKD9 419 aa26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 TBC1D12O60347 775 aa26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 PPP4CP60510 307 aa26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 CERS3Q8IU89 383 aa26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 KCNH4Q9UQ05 1017 aa26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 MYO5AQ9Y4I1 1855 aaKnown RBP26.02■■□□□ 1.76
UBE2D3-201ENST00000321805 PHF20L1A8MW92 1017 aa26.01■■□□□ 1.75
UBE2D3-201ENST00000321805 TEX11Q8IYF3 940 aa26.01■■□□□ 1.75
UBE2D3-201ENST00000321805 SCYL3Q8IZE3 742 aa26.01■■□□□ 1.75
UBE2D3-201ENST00000321805 OSBPL5Q9H0X9 879 aaPredicted RBP26.01■■□□□ 1.75
UBE2D3-201ENST00000321805 IL1RAPL2Q9NP60 686 aa26.01■■□□□ 1.75
UBE2D3-201ENST00000321805 C20orf194Q5TEA3 1177 aa26■■□□□ 1.75
UBE2D3-201ENST00000321805 ERO1AQ96HE7 468 aa26■■□□□ 1.75
UBE2D3-201ENST00000321805 ZFYVE28Q9HCC9 887 aa26■■□□□ 1.75
UBE2D3-201ENST00000321805 PIH1D3Q9NQM4 214 aaKnown RBP26■■□□□ 1.75
UBE2D3-201ENST00000321805 DOCK1Q14185 1865 aa26■■□□□ 1.75
UBE2D3-201ENST00000321805 TAF1CQ15572 869 aaPredicted RBP25.99■■□□□ 1.75
UBE2D3-201ENST00000321805 FAM43AQ8N2R8 423 aa25.99■■□□□ 1.75
UBE2D3-201ENST00000321805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.99■■□□□ 1.75
UBE2D3-201ENST00000321805 AATFQ9NY61 560 aaKnown RBP eCLIP25.99■■□□□ 1.756e-12■■□□□ 12.2
UBE2D3-201ENST00000321805 FOCADQ5VW36 1801 aa25.99■■□□□ 1.75
UBE2D3-201ENST00000321805 CTNND1O60716 968 aaKnown RBP25.98■■□□□ 1.75
UBE2D3-201ENST00000321805 SH3RF3Q8TEJ3 882 aaPredicted RBP25.98■■□□□ 1.75
UBE2D3-201ENST00000321805 DHX36Q9H2U1 1008 aaKnown RBP25.98■■□□□ 1.75
UBE2D3-201ENST00000321805 PICK1Q9NRD5 415 aa25.98■■□□□ 1.75
UBE2D3-201ENST00000321805 IFIT2P09913 472 aaKnown RBP25.97■■□□□ 1.75
UBE2D3-201ENST00000321805 MAP3K12Q12852 859 aa25.97■■□□□ 1.75
UBE2D3-201ENST00000321805 TTF1Q15361 905 aaPredicted RBP25.97■■□□□ 1.75
UBE2D3-201ENST00000321805 FBXO46Q6PJ61 603 aaPredicted RBP25.97■■□□□ 1.75
UBE2D3-201ENST00000321805 CDK5RAP2Q96SN8 1893 aa25.97■■□□□ 1.75
UBE2D3-201ENST00000321805 BTBD19C9JJ37 291 aa25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 CXCL11O14625 94 aa25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 IDH1O75874 414 aaKnown RBP25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 SP3Q02447 781 aa25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 ADGRA1Q86SQ6 560 aa25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 HERC5Q9UII4 1024 aaKnown RBP25.96■■□□□ 1.75
UBE2D3-201ENST00000321805 ANKRD23Q86SG2 305 aa25.95■■□□□ 1.74
UBE2D3-201ENST00000321805 PTPRAP18433 802 aa25.94■■□□□ 1.74
UBE2D3-201ENST00000321805 CYP7A1P22680 504 aa25.94■■□□□ 1.74
UBE2D3-201ENST00000321805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.94■■□□□ 1.74
UBE2D3-201ENST00000321805 PI4KBQ9UBF8 816 aa25.94■■□□□ 1.74
UBE2D3-201ENST00000321805 HPS5Q9UPZ3 1129 aa25.94■■□□□ 1.74
UBE2D3-201ENST00000321805 FLT1P17948 1338 aa25.93■■□□□ 1.74
UBE2D3-201ENST00000321805 APBB1O00213 710 aa25.93■■□□□ 1.74
UBE2D3-201ENST00000321805 TLR2O60603 784 aa25.93■■□□□ 1.74
UBE2D3-201ENST00000321805 RGS19P49795 217 aa25.93■■□□□ 1.74
UBE2D3-201ENST00000321805 ARHGEF6Q15052 776 aa25.93■■□□□ 1.74
UBE2D3-201ENST00000321805 OTOP1Q7RTM1 612 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 MAGEB6Q8N7X4 407 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 TGFBRAP1Q8WUH2 860 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 TBC1D2Q9BYX2 928 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 ANTXR1Q9H6X2 564 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 TRIM17Q9Y577 477 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 ZHX2Q9Y6X8 837 aa25.92■■□□□ 1.74
UBE2D3-201ENST00000321805 PHIPQ8WWQ0 1821 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 PTPRFP10586 1907 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 MOGSQ13724 837 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 FASTKD5Q7L8L6 764 aaKnown RBP25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 LRRCC1Q9C099 1032 aa25.91■■□□□ 1.74
UBE2D3-201ENST00000321805 AFG3L2Q9Y4W6 797 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms