RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 DALRD3Q5D0E6 543 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 SPATA32Q96LK8 384 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 ARMT1Q9H993 441 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 ATP6V0A2Q9Y487 856 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 TSPY3P0CV98 308 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 TSPY8P0CW00 308 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 DHX8Q14562 1220 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 OLFM4Q6UX06 510 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 C15orf52Q6ZUT6 534 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 CTAGE5O15320 804 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 PTH1RQ03431 593 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 TTLL6Q8N841 843 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 IVNS1ABPQ9Y6Y0 642 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 FGAP02671 866 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 MRE11P49959 708 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 FBXO33Q7Z6M2 555 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 NAT10Q9H0A0 1025 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 CSADQ9Y600 493 aa9.88□□□□□ -0.83
PDLIM5-201ENST00000317968 CHMP4BP1P59074 171 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 STIM1Q13586 685 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 FAM13BQ9NYF5 915 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 DCAF15Q66K64 600 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 KCNB2Q92953 911 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 STRBPQ96SI9 672 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■■■■ 86.5
PDLIM5-201ENST00000317968 PFKFB2O60825 505 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 PRPF40AO75400 957 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 KCNQ4P56696 695 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 PPARAQ07869 468 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 MIGA1Q8NAN2 632 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 EDC3Q96F86 508 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 CCDC17Q96LX7 622 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 AS3MTQ9HBK9 375 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 F8W031 263 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 LIFRP42702 1097 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 FAM177A1Q8N128 213 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
PDLIM5-201ENST00000317968 RIC1Q4ADV7 1423 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 KDM4AO75164 1064 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 CCDC129Q6ZRS4 1044 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 OSBP2Q969R2 916 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 USP48Q86UV5 1035 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 FAM84BQ96KN1 310 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 MAGEC2Q9UBF1 373 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 PNMA2Q9UL42 364 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 FIBPO43427 364 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 F13A1P00488 732 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 CYP2E1P05181 493 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 TTLL5Q6EMB2 1281 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 GTF3C6Q969F1 213 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 CYP21A2P08686 494 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 TMEM266Q2M3C6 531 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 SYNE4Q8N205 404 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 DHX36Q9H2U1 1008 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 CD209Q9NNX6 404 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 MICU3Q86XE3 530 aa9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 PIH1D3Q9NQM4 214 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-201ENST00000317968 UBE2HP62256 183 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 IL17RAQ96F46 866 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 DLGAP5Q15398 846 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 MSL1Q68DK7 614 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 MCTP2Q6DN12 878 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 APBB1IPQ7Z5R6 666 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 KCNG4Q8TDN1 519 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 DDAH1O94760 285 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 DEXIO95424 95 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 GTF2IP78347 998 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 NAP1L4Q99733 375 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 PODXL2Q9NZ53 605 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 ABCA3Q99758 1704 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 ZBTB22O15209 634 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 OFD1O75665 1012 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 HDLBPQ00341 1268 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 CCDC70Q6NSX1 233 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 ARHGEF10LQ9HCE6 1279 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 SALL1Q9NSC2 1324 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 NCBP1Q09161 790 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 DDX11Q96FC9 970 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
PDLIM5-201ENST00000317968 PTPDC1A2A3K4 754 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 GZF1Q9H116 711 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 PALD1Q9ULE6 856 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 TTF2Q9UNY4 1162 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 ALG1Q9BT22 464 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 PIM2Q9P1W9 311 aa9.84□□□□□ -0.83
PDLIM5-201ENST00000317968 ARMC9Q7Z3E5 817 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms